Cluster: Rep_2980_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2980
- CGC Family ID: CGCFAM_00093
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2980_c_58 | Rep_2980_c_58_2 | 955 | 1935 | + | 3.A.1.2.12 |
| NULL(UNKNOWN) | Rep_2980_c_58 | Rep_2980_c_58_3 | 2136 | 3578 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2980_c_58 | Rep_2980_c_58_4 | 3950 | 6109 | + | CBM67 | GH78 |
| NULL(UNKNOWN) | Rep_2980_c_58 | Rep_2980_c_58_5 | 6106 | 7455 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2980_c_58 | Rep_2980_c_58_6 | 7520 | 8773 | + | GH1 |
| CAZyme | Rep_2980_c_58 | Rep_2980_c_58_7 | 8874 | 11063 | - | GH3 |
Gene ID: Rep_2980_c_58_2
Type: TC
Location: 955 - 1935 (+)
Type: TC
Location: 955 - 1935 (+)
Gene ID: Rep_2980_c_58_3
Type:
Location: 2136 - 3578 (-)
Type:
Location: 2136 - 3578 (-)
Gene ID: Rep_2980_c_58_4
Type: CAZyme
Location: 3950 - 6109 (+)
Type: CAZyme
Location: 3950 - 6109 (+)
Gene ID: Rep_2980_c_58_5
Type:
Location: 6106 - 7455 (+)
Type:
Location: 6106 - 7455 (+)
Gene ID: Rep_2980_c_58_6
Type: CAZyme
Location: 7520 - 8773 (+)
Type: CAZyme
Location: 7520 - 8773 (+)
Gene ID: Rep_2980_c_58_7
Type: CAZyme
Location: 8874 - 11063 (-)
Type: CAZyme
Location: 8874 - 11063 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp900764115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.