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Cluster: Rep_2980_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2980_c_184 Rep_2980_c_184_15 13834 14415 - 3.D.6.1.2
TC Rep_2980_c_184 Rep_2980_c_184_16 14408 15202 - 3.D.6.1.2
pfam Rep_2980_c_184 Rep_2980_c_184_17 15199 15762 - FMN_bind
TC Rep_2980_c_184 Rep_2980_c_184_18 15759 16778 - 3.D.6.1.2
TC Rep_2980_c_184 Rep_2980_c_184_19 16782 18128 - 3.D.6.1.2
NULL(UNKNOWN) Rep_2980_c_184 Rep_2980_c_184_20 18314 18949 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_2980_c_184 Rep_2980_c_184_21 18975 20402 - Cadherin-like
CAZyme Rep_2980_c_184 Rep_2980_c_184_22 20417 22333 - GH73
Gene ID: Rep_2980_c_184_15
Type: TC
Location: 13834 - 14415 (-)
Gene ID: Rep_2980_c_184_16
Type: TC
Location: 14408 - 15202 (-)
Gene ID: Rep_2980_c_184_17
Type: pfam
Location: 15199 - 15762 (-)
Gene ID: Rep_2980_c_184_18
Type: TC
Location: 15759 - 16778 (-)
Gene ID: Rep_2980_c_184_19
Type: TC
Location: 16782 - 18128 (-)
Gene ID: Rep_2980_c_184_20
Type:
Location: 18314 - 18949 (-)
Gene ID: Rep_2980_c_184_21
Type: pfam
Location: 18975 - 20402 (-)
Gene ID: Rep_2980_c_184_22
Type: CAZyme
Location: 20417 - 22333 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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