Cluster: Rep_2980_CGC3
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2980
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2980_c_24 | Rep_2980_c_24_1 | 151 | 8514 | - | CBM67 |
| NULL(UNKNOWN) | Rep_2980_c_24 | Rep_2980_c_24_2 | 8547 | 8867 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2980_c_24 | Rep_2980_c_24_3 | 8922 | 10745 | - | Flg_new |
| TC | Rep_2980_c_24 | Rep_2980_c_24_4 | 11113 | 12930 | + | 8.A.59.2.1 |
| TF | Rep_2980_c_24 | Rep_2980_c_24_5 | 13015 | 14037 | + | HTH_AraC | HTH_AraC |
| TC | Rep_2980_c_24 | Rep_2980_c_24_6 | 14198 | 14875 | + | 3.A.1.3.28 |
| TC | Rep_2980_c_24 | Rep_2980_c_24_7 | 14879 | 15616 | + | 3.A.1.3.13 |
| TC | Rep_2980_c_24 | Rep_2980_c_24_8 | 15633 | 16433 | + | 3.A.1.3.14 |
Gene ID: Rep_2980_c_24_1
Type: CAZyme
Location: 151 - 8514 (-)
Type: CAZyme
Location: 151 - 8514 (-)
Gene ID: Rep_2980_c_24_2
Type:
Location: 8547 - 8867 (-)
Type:
Location: 8547 - 8867 (-)
Gene ID: Rep_2980_c_24_3
Type: pfam
Location: 8922 - 10745 (-)
Type: pfam
Location: 8922 - 10745 (-)
Gene ID: Rep_2980_c_24_4
Type: TC
Location: 11113 - 12930 (+)
Type: TC
Location: 11113 - 12930 (+)
Gene ID: Rep_2980_c_24_5
Type: TF
Location: 13015 - 14037 (+)
Type: TF
Location: 13015 - 14037 (+)
Gene ID: Rep_2980_c_24_6
Type: TC
Location: 14198 - 14875 (+)
Type: TC
Location: 14198 - 14875 (+)
Gene ID: Rep_2980_c_24_7
Type: TC
Location: 14879 - 15616 (+)
Type: TC
Location: 14879 - 15616 (+)
Gene ID: Rep_2980_c_24_8
Type: TC
Location: 15633 - 16433 (+)
Type: TC
Location: 15633 - 16433 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp900764115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2980_c_24_6 | vegetarian > omnivore | 2.07260 | 0.03196 |
| Rep_2980_c_24_6 | vegetarian > vegan | 1.20412 | 0.02017 |
| Rep_2980_c_24_8 | vegetarian > omnivore | 1.76977 | 0.04818 |
| Rep_2980_c_24_8 | vegetarian > vegan | 1.10071 | 0.02017 |