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Cluster: Rep_2980_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2980_c_173 Rep_2980_c_173_5 2678 4411 - 3.A.1.106.12
STP Rep_2980_c_173 Rep_2980_c_173_6 4437 5462 - PfkB
STP Rep_2980_c_173 Rep_2980_c_173_7 5630 6604 - HATPase_c | HisKA | Response_reg
TC Rep_2980_c_173 Rep_2980_c_173_8 6781 7440 - 3.A.1.17.2
TC Rep_2980_c_173 Rep_2980_c_173_9 7437 8204 - 3.A.1.17.5
pfam Rep_2980_c_173 Rep_2980_c_173_10 8194 9387 - NMT1 | Phosphonate-bd
STP Rep_2980_c_173 Rep_2980_c_173_11 9384 10061 - cNMP_binding
CAZyme Rep_2980_c_173 Rep_2980_c_173_12 10213 12492 + GH95
Gene ID: Rep_2980_c_173_5
Type: TC
Location: 2678 - 4411 (-)
Gene ID: Rep_2980_c_173_6
Type: STP
Location: 4437 - 5462 (-)
Gene ID: Rep_2980_c_173_7
Type: STP
Location: 5630 - 6604 (-)
Gene ID: Rep_2980_c_173_8
Type: TC
Location: 6781 - 7440 (-)
Gene ID: Rep_2980_c_173_9
Type: TC
Location: 7437 - 8204 (-)
Gene ID: Rep_2980_c_173_10
Type: pfam
Location: 8194 - 9387 (-)
Gene ID: Rep_2980_c_173_11
Type: STP
Location: 9384 - 10061 (-)
Gene ID: Rep_2980_c_173_12
Type: CAZyme
Location: 10213 - 12492 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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