Cluster: Rep_2980_CGC28
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2980
- CGC Family ID: CGCFAM_11146
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2980_c_157 | Rep_2980_c_157_2 | 4477 | 5652 | - | GH179 |
| pfam | Rep_2980_c_157 | Rep_2980_c_157_3 | 5727 | 6563 | - | AP_endonuc_2 |
| CAZyme | Rep_2980_c_157 | Rep_2980_c_157_4 | 6889 | 9981 | + | GH106 |
| NULL(UNKNOWN) | Rep_2980_c_157 | Rep_2980_c_157_5 | 10071 | 11396 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2980_c_157 | Rep_2980_c_157_6 | 11535 | 11807 | - | ATP-synt_DE_N |
| TC | Rep_2980_c_157 | Rep_2980_c_157_7 | 11804 | 13168 | - | 3.A.2.1.5 |
| TC | Rep_2980_c_157 | Rep_2980_c_157_8 | 13219 | 14019 | - | 3.A.2.1.5 |
| TC | Rep_2980_c_157 | Rep_2980_c_157_9 | 14024 | 15514 | - | 3.A.2.1.5 |
| TC | Rep_2980_c_157 | Rep_2980_c_157_10 | 15511 | 16041 | - | 3.A.2.1.7 |
| pfam | Rep_2980_c_157 | Rep_2980_c_157_11 | 16025 | 16549 | - | ATP-synt_B |
| TC | Rep_2980_c_157 | Rep_2980_c_157_12 | 16562 | 16846 | - | 3.A.2.1.5 |
| TC | Rep_2980_c_157 | Rep_2980_c_157_13 | 16887 | 17798 | - | 3.A.2.1.5 |
Gene ID: Rep_2980_c_157_2
Type: CAZyme
Location: 4477 - 5652 (-)
Type: CAZyme
Location: 4477 - 5652 (-)
Gene ID: Rep_2980_c_157_3
Type: pfam
Location: 5727 - 6563 (-)
Type: pfam
Location: 5727 - 6563 (-)
Gene ID: Rep_2980_c_157_4
Type: CAZyme
Location: 6889 - 9981 (+)
Type: CAZyme
Location: 6889 - 9981 (+)
Gene ID: Rep_2980_c_157_5
Type:
Location: 10071 - 11396 (+)
Type:
Location: 10071 - 11396 (+)
Gene ID: Rep_2980_c_157_6
Type: pfam
Location: 11535 - 11807 (-)
Type: pfam
Location: 11535 - 11807 (-)
Gene ID: Rep_2980_c_157_7
Type: TC
Location: 11804 - 13168 (-)
Type: TC
Location: 11804 - 13168 (-)
Gene ID: Rep_2980_c_157_8
Type: TC
Location: 13219 - 14019 (-)
Type: TC
Location: 13219 - 14019 (-)
Gene ID: Rep_2980_c_157_9
Type: TC
Location: 14024 - 15514 (-)
Type: TC
Location: 14024 - 15514 (-)
Gene ID: Rep_2980_c_157_10
Type: TC
Location: 15511 - 16041 (-)
Type: TC
Location: 15511 - 16041 (-)
Gene ID: Rep_2980_c_157_11
Type: pfam
Location: 16025 - 16549 (-)
Type: pfam
Location: 16025 - 16549 (-)
Gene ID: Rep_2980_c_157_12
Type: TC
Location: 16562 - 16846 (-)
Type: TC
Location: 16562 - 16846 (-)
Gene ID: Rep_2980_c_157_13
Type: TC
Location: 16887 - 17798 (-)
Type: TC
Location: 16887 - 17798 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp900764115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2980_c_157_12 | vegetarian > vegan | 1.01762 | 0.02017 |