Cluster: Rep_2980_CGC25
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2980
- CGC Family ID: CGCFAM_01690
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2980_c_152 | Rep_2980_c_152_2 | 1331 | 2095 | + | 3.A.1.134.4 |
| TC | Rep_2980_c_152 | Rep_2980_c_152_3 | 2092 | 4119 | + | 3.A.1.134.9 |
| NULL(UNKNOWN) | Rep_2980_c_152 | Rep_2980_c_152_4 | 4211 | 4720 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_2980_c_152 | Rep_2980_c_152_5 | 4801 | 5127 | + | HTH_AraC |
| CAZyme | Rep_2980_c_152 | Rep_2980_c_152_6 | 5176 | 6345 | - | GH177 |
| pfam | Rep_2980_c_152 | Rep_2980_c_152_7 | 6379 | 7143 | - | AP_endonuc_2 |
| CAZyme | Rep_2980_c_152 | Rep_2980_c_152_8 | 7162 | 8331 | - | GH177 |
Gene ID: Rep_2980_c_152_2
Type: TC
Location: 1331 - 2095 (+)
Type: TC
Location: 1331 - 2095 (+)
Gene ID: Rep_2980_c_152_3
Type: TC
Location: 2092 - 4119 (+)
Type: TC
Location: 2092 - 4119 (+)
Gene ID: Rep_2980_c_152_4
Type:
Location: 4211 - 4720 (-)
Type:
Location: 4211 - 4720 (-)
Gene ID: Rep_2980_c_152_5
Type: TF
Location: 4801 - 5127 (+)
Type: TF
Location: 4801 - 5127 (+)
Gene ID: Rep_2980_c_152_6
Type: CAZyme
Location: 5176 - 6345 (-)
Type: CAZyme
Location: 5176 - 6345 (-)
Gene ID: Rep_2980_c_152_7
Type: pfam
Location: 6379 - 7143 (-)
Type: pfam
Location: 6379 - 7143 (-)
Gene ID: Rep_2980_c_152_8
Type: CAZyme
Location: 7162 - 8331 (-)
Type: CAZyme
Location: 7162 - 8331 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp900764115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.