Cluster: Rep_2980_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2980
- CGC Family ID: CGCFAM_11265
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2980_c_145 | Rep_2980_c_145_2 | 876 | 1685 | + | 1.A.23.2.2 |
| STP | Rep_2980_c_145 | Rep_2980_c_145_3 | 1877 | 2434 | + | Sigma70_r2 | Sigma70_r4_2 |
| NULL(UNKNOWN) | Rep_2980_c_145 | Rep_2980_c_145_4 | 2421 | 3068 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2980_c_145 | Rep_2980_c_145_5 | 3168 | 4709 | - | GH77 |
Gene ID: Rep_2980_c_145_2
Type: TC
Location: 876 - 1685 (+)
Type: TC
Location: 876 - 1685 (+)
Gene ID: Rep_2980_c_145_3
Type: STP
Location: 1877 - 2434 (+)
Type: STP
Location: 1877 - 2434 (+)
Gene ID: Rep_2980_c_145_4
Type:
Location: 2421 - 3068 (+)
Type:
Location: 2421 - 3068 (+)
Gene ID: Rep_2980_c_145_5
Type: CAZyme
Location: 3168 - 4709 (-)
Type: CAZyme
Location: 3168 - 4709 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp900764115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.