Cluster: Rep_2980_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2980
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2980_c_119 | Rep_2980_c_119_1 | 2 | 6694 | + | CBM67 |
| STP | Rep_2980_c_119 | Rep_2980_c_119_2 | 6691 | 8163 | + | SBP_bac_1 |
| pfam | Rep_2980_c_119 | Rep_2980_c_119_3 | 8185 | 9087 | + | BPD_transp_1 |
| TC | Rep_2980_c_119 | Rep_2980_c_119_4 | 9089 | 9961 | + | 3.A.1.1.12 |
| pfam | Rep_2980_c_119 | Rep_2980_c_119_5 | 10025 | 12667 | + | Dockerin_1 | CBM_4_9 |
| CAZyme | Rep_2980_c_119 | Rep_2980_c_119_6 | 12755 | 14458 | + | PL37 |
Gene ID: Rep_2980_c_119_1
Type: CAZyme
Location: 2 - 6694 (+)
Type: CAZyme
Location: 2 - 6694 (+)
Gene ID: Rep_2980_c_119_2
Type: STP
Location: 6691 - 8163 (+)
Type: STP
Location: 6691 - 8163 (+)
Gene ID: Rep_2980_c_119_3
Type: pfam
Location: 8185 - 9087 (+)
Type: pfam
Location: 8185 - 9087 (+)
Gene ID: Rep_2980_c_119_4
Type: TC
Location: 9089 - 9961 (+)
Type: TC
Location: 9089 - 9961 (+)
Gene ID: Rep_2980_c_119_5
Type: pfam
Location: 10025 - 12667 (+)
Type: pfam
Location: 10025 - 12667 (+)
Gene ID: Rep_2980_c_119_6
Type: CAZyme
Location: 12755 - 14458 (+)
Type: CAZyme
Location: 12755 - 14458 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp900764115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.