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Cluster: Rep_297_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_297_c_246 Rep_297_c_246_5 8395 9798 - 4.A.5.1.4
sulfatase Rep_297_c_246 Rep_297_c_246_6 9798 10589 - S1_2
sulfatase Rep_297_c_246 Rep_297_c_246_7 10610 11815 - S1_27
CAZyme Rep_297_c_246 Rep_297_c_246_8 11938 15264 - GH105 | GH154 | GH43_24
TF Rep_297_c_246 Rep_297_c_246_9 15313 18927 - HTH_AraC
TC Rep_297_c_246 Rep_297_c_246_10 19236 22487 + 1.B.14.6.1
pfam Rep_297_c_246 Rep_297_c_246_11 22520 24628 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) Rep_297_c_246 Rep_297_c_246_12 24828 25658 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_297_c_246 Rep_297_c_246_13 25785 27404 + GH16_3
Gene ID: Rep_297_c_246_5
Type: TC
Location: 8395 - 9798 (-)
Gene ID: Rep_297_c_246_6
Type: sulfatase
Location: 9798 - 10589 (-)
Gene ID: Rep_297_c_246_7
Type: sulfatase
Location: 10610 - 11815 (-)
Gene ID: Rep_297_c_246_8
Type: CAZyme
Location: 11938 - 15264 (-)
Gene ID: Rep_297_c_246_9
Type: TF
Location: 15313 - 18927 (-)
Gene ID: Rep_297_c_246_10
Type: TC
Location: 19236 - 22487 (+)
Gene ID: Rep_297_c_246_11
Type: pfam
Location: 22520 - 24628 (+)
Gene ID: Rep_297_c_246_12
Type:
Location: 24828 - 25658 (+)
Gene ID: Rep_297_c_246_13
Type: CAZyme
Location: 25785 - 27404 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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