Cluster: Rep_297_CGC34
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_297
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_297_c_196 | Rep_297_c_196_4 | 2334 | 3197 | - | 1.A.30.1.4 |
| peptidase | Rep_297_c_196 | Rep_297_c_196_5 | 3232 | 4251 | - | S33.UPW |
| peptidase | Rep_297_c_196 | Rep_297_c_196_6 | 4890 | 6191 | - | S12.UPW |
| CAZyme | Rep_297_c_196 | Rep_297_c_196_7 | 6309 | 7850 | - | GH43_4 |
| TF | Rep_297_c_196 | Rep_297_c_196_8 | 8026 | 12207 | + | HTH_AraC |
| NULL(UNKNOWN) | Rep_297_c_196 | Rep_297_c_196_9 | 12387 | 14225 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_297_c_196 | Rep_297_c_196_10 | 14256 | 17372 | + | 1.B.14.6.1 |
Gene ID: Rep_297_c_196_4
Type: TC
Location: 2334 - 3197 (-)
Type: TC
Location: 2334 - 3197 (-)
Gene ID: Rep_297_c_196_5
Type: peptidase
Location: 3232 - 4251 (-)
Type: peptidase
Location: 3232 - 4251 (-)
Gene ID: Rep_297_c_196_6
Type: peptidase
Location: 4890 - 6191 (-)
Type: peptidase
Location: 4890 - 6191 (-)
Gene ID: Rep_297_c_196_7
Type: CAZyme
Location: 6309 - 7850 (-)
Type: CAZyme
Location: 6309 - 7850 (-)
Gene ID: Rep_297_c_196_8
Type: TF
Location: 8026 - 12207 (+)
Type: TF
Location: 8026 - 12207 (+)
Gene ID: Rep_297_c_196_9
Type:
Location: 12387 - 14225 (+)
Type:
Location: 12387 - 14225 (+)
Gene ID: Rep_297_c_196_10
Type: TC
Location: 14256 - 17372 (+)
Type: TC
Location: 14256 - 17372 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp947575235
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.