Cluster: Rep_297_CGC26
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_297
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_297_c_155 | Rep_297_c_155_7 | 9785 | 11602 | - | GH2 |
| TF | Rep_297_c_155 | Rep_297_c_155_8 | 11845 | 15963 | + | HTH_AraC |
| CAZyme | Rep_297_c_155 | Rep_297_c_155_9 | 16113 | 17567 | + | GH125 |
| pfam | Rep_297_c_155 | Rep_297_c_155_10 | 17603 | 18532 | + | Exo_endo_phos |
| NULL(UNKNOWN) | Rep_297_c_155 | Rep_297_c_155_11 | 18606 | 18728 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_297_c_155 | Rep_297_c_155_12 | 18747 | 21878 | + | GH2 |
| TC | Rep_297_c_155 | Rep_297_c_155_13 | 21948 | 22382 | - | 1.A.22.1.1 |
| pfam | Rep_297_c_155 | Rep_297_c_155_14 | 22651 | 23658 | + | Gp_dh_N | Gp_dh_C |
| TC | Rep_297_c_155 | Rep_297_c_155_15 | 23874 | 25019 | + | 9.B.146.1.4 |
| sulfatase | Rep_297_c_155 | Rep_297_c_155_16 | 25171 | 26304 | + | S1_7 |
| CAZyme | Rep_297_c_155 | Rep_297_c_155_17 | 26381 | 27883 | - | GH32 |
| pfam | Rep_297_c_155 | Rep_297_c_155_18 | 27886 | 29388 | - | DUF4960 |
| pfam | Rep_297_c_155 | Rep_297_c_155_19 | 29415 | 31151 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_297_c_155 | Rep_297_c_155_20 | 31175 | 34297 | - | 1.B.14.6.1 |
| CAZyme | Rep_297_c_155 | Rep_297_c_155_21 | 34523 | 36154 | - | GH32 |
Gene ID: Rep_297_c_155_7
Type: CAZyme
Location: 9785 - 11602 (-)
Type: CAZyme
Location: 9785 - 11602 (-)
Gene ID: Rep_297_c_155_8
Type: TF
Location: 11845 - 15963 (+)
Type: TF
Location: 11845 - 15963 (+)
Gene ID: Rep_297_c_155_9
Type: CAZyme
Location: 16113 - 17567 (+)
Type: CAZyme
Location: 16113 - 17567 (+)
Gene ID: Rep_297_c_155_10
Type: pfam
Location: 17603 - 18532 (+)
Type: pfam
Location: 17603 - 18532 (+)
Gene ID: Rep_297_c_155_11
Type:
Location: 18606 - 18728 (-)
Type:
Location: 18606 - 18728 (-)
Gene ID: Rep_297_c_155_12
Type: CAZyme
Location: 18747 - 21878 (+)
Type: CAZyme
Location: 18747 - 21878 (+)
Gene ID: Rep_297_c_155_13
Type: TC
Location: 21948 - 22382 (-)
Type: TC
Location: 21948 - 22382 (-)
Gene ID: Rep_297_c_155_14
Type: pfam
Location: 22651 - 23658 (+)
Type: pfam
Location: 22651 - 23658 (+)
Gene ID: Rep_297_c_155_15
Type: TC
Location: 23874 - 25019 (+)
Type: TC
Location: 23874 - 25019 (+)
Gene ID: Rep_297_c_155_16
Type: sulfatase
Location: 25171 - 26304 (+)
Type: sulfatase
Location: 25171 - 26304 (+)
Gene ID: Rep_297_c_155_17
Type: CAZyme
Location: 26381 - 27883 (-)
Type: CAZyme
Location: 26381 - 27883 (-)
Gene ID: Rep_297_c_155_18
Type: pfam
Location: 27886 - 29388 (-)
Type: pfam
Location: 27886 - 29388 (-)
Gene ID: Rep_297_c_155_19
Type: pfam
Location: 29415 - 31151 (-)
Type: pfam
Location: 29415 - 31151 (-)
Gene ID: Rep_297_c_155_20
Type: TC
Location: 31175 - 34297 (-)
Type: TC
Location: 31175 - 34297 (-)
Gene ID: Rep_297_c_155_21
Type: CAZyme
Location: 34523 - 36154 (-)
Type: CAZyme
Location: 34523 - 36154 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp947575235
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.