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Cluster: Rep_297_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_297_c_69 Rep_297_c_69_1 2 2206 - 1.B.14.6.1
pfam Rep_297_c_69 Rep_297_c_69_2 2373 4052 - DUF6377
TC Rep_297_c_69 Rep_297_c_69_3 4181 4936 + 2.A.5.5.2
pfam Rep_297_c_69 Rep_297_c_69_4 4961 6286 - DcaP
CAZyme Rep_297_c_69 Rep_297_c_69_5 6365 7555 - GH25
pfam Rep_297_c_69 Rep_297_c_69_6 7706 8782 - DUF4934 | DUF5128
pfam Rep_297_c_69 Rep_297_c_69_7 8977 10299 - OEP | OEP
TC Rep_297_c_69 Rep_297_c_69_8 10340 11437 - 2.A.6.2.27
TC Rep_297_c_69 Rep_297_c_69_9 11476 12732 - 3.A.1.122.3
TC Rep_297_c_69 Rep_297_c_69_10 12748 13971 - 3.A.1.122.7
TC Rep_297_c_69 Rep_297_c_69_11 13968 14666 - 3.A.1.122.2
Gene ID: Rep_297_c_69_1
Type: TC
Location: 2 - 2206 (-)
Gene ID: Rep_297_c_69_2
Type: pfam
Location: 2373 - 4052 (-)
Gene ID: Rep_297_c_69_3
Type: TC
Location: 4181 - 4936 (+)
Gene ID: Rep_297_c_69_4
Type: pfam
Location: 4961 - 6286 (-)
Gene ID: Rep_297_c_69_5
Type: CAZyme
Location: 6365 - 7555 (-)
Gene ID: Rep_297_c_69_6
Type: pfam
Location: 7706 - 8782 (-)
Gene ID: Rep_297_c_69_7
Type: pfam
Location: 8977 - 10299 (-)
Gene ID: Rep_297_c_69_8
Type: TC
Location: 10340 - 11437 (-)
Gene ID: Rep_297_c_69_9
Type: TC
Location: 11476 - 12732 (-)
Gene ID: Rep_297_c_69_10
Type: TC
Location: 12748 - 13971 (-)
Gene ID: Rep_297_c_69_11
Type: TC
Location: 13968 - 14666 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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