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Cluster: Rep_297_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_297_c_0 Rep_297_c_0_6 4610 7825 - 2.A.6.2.16
TC Rep_297_c_0 Rep_297_c_0_7 7838 8956 - 2.A.6.2.44
TC Rep_297_c_0 Rep_297_c_0_8 8970 10397 - 2.A.6.2.18
pfam Rep_297_c_0 Rep_297_c_0_9 10485 11657 - GlcNAc_2-epim
TC Rep_297_c_0 Rep_297_c_0_10 11662 13089 - 2.A.2.3.5
CAZyme Rep_297_c_0 Rep_297_c_0_11 13180 14349 - GH130_1
CAZyme Rep_297_c_0 Rep_297_c_0_12 14411 15520 - GH26
CAZyme Rep_297_c_0 Rep_297_c_0_13 15517 17958 - GH94
CAZyme Rep_297_c_0 Rep_297_c_0_14 17984 19381 - GH26
Gene ID: Rep_297_c_0_6
Type: TC
Location: 4610 - 7825 (-)
Gene ID: Rep_297_c_0_7
Type: TC
Location: 7838 - 8956 (-)
Gene ID: Rep_297_c_0_8
Type: TC
Location: 8970 - 10397 (-)
Gene ID: Rep_297_c_0_9
Type: pfam
Location: 10485 - 11657 (-)
Gene ID: Rep_297_c_0_10
Type: TC
Location: 11662 - 13089 (-)
Gene ID: Rep_297_c_0_11
Type: CAZyme
Location: 13180 - 14349 (-)
Gene ID: Rep_297_c_0_12
Type: CAZyme
Location: 14411 - 15520 (-)
Gene ID: Rep_297_c_0_13
Type: CAZyme
Location: 15517 - 17958 (-)
Gene ID: Rep_297_c_0_14
Type: CAZyme
Location: 17984 - 19381 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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