Cluster: Rep_2978_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2978
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2978_c_4 | Rep_2978_c_4_87 | 77289 | 78236 | + | 3.A.1.34.1 |
| TC | Rep_2978_c_4 | Rep_2978_c_4_88 | 78233 | 79006 | + | 3.A.1.34.1 |
| CAZyme | Rep_2978_c_4 | Rep_2978_c_4_89 | 79195 | 81486 | + | GH31_3 |
| CAZyme | Rep_2978_c_4 | Rep_2978_c_4_90 | 81559 | 83841 | + | GH31 |
| CAZyme | Rep_2978_c_4 | Rep_2978_c_4_91 | 83857 | 86112 | + | GH31 |
| TC | Rep_2978_c_4 | Rep_2978_c_4_92 | 86205 | 87131 | - | 3.A.1.1.20 |
| TC | Rep_2978_c_4 | Rep_2978_c_4_93 | 87170 | 88099 | - | 3.A.1.1.11 |
Gene ID: Rep_2978_c_4_87
Type: TC
Location: 77289 - 78236 (+)
Type: TC
Location: 77289 - 78236 (+)
Gene ID: Rep_2978_c_4_88
Type: TC
Location: 78233 - 79006 (+)
Type: TC
Location: 78233 - 79006 (+)
Gene ID: Rep_2978_c_4_89
Type: CAZyme
Location: 79195 - 81486 (+)
Type: CAZyme
Location: 79195 - 81486 (+)
Gene ID: Rep_2978_c_4_90
Type: CAZyme
Location: 81559 - 83841 (+)
Type: CAZyme
Location: 81559 - 83841 (+)
Gene ID: Rep_2978_c_4_91
Type: CAZyme
Location: 83857 - 86112 (+)
Type: CAZyme
Location: 83857 - 86112 (+)
Gene ID: Rep_2978_c_4_92
Type: TC
Location: 86205 - 87131 (-)
Type: TC
Location: 86205 - 87131 (-)
Gene ID: Rep_2978_c_4_93
Type: TC
Location: 87170 - 88099 (-)
Type: TC
Location: 87170 - 88099 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp900549155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.