Cluster: Rep_2978_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2978
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2978_c_16 | Rep_2978_c_16_36 | 35556 | 36965 | - | 9.A.11.1.1 |
| pfam | Rep_2978_c_16 | Rep_2978_c_16_37 | 37016 | 37525 | - | Acetyltransf_1 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_10 |
| TF | Rep_2978_c_16 | Rep_2978_c_16_38 | 37636 | 38019 | + | GntR |
| TC | Rep_2978_c_16 | Rep_2978_c_16_39 | 38012 | 38917 | + | 3.A.1.132.6 |
| NULL(UNKNOWN) | Rep_2978_c_16 | Rep_2978_c_16_40 | 38914 | 40986 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2978_c_16 | Rep_2978_c_16_41 | 41042 | 43438 | - | GT35 |
Gene ID: Rep_2978_c_16_36
Type: TC
Location: 35556 - 36965 (-)
Type: TC
Location: 35556 - 36965 (-)
Gene ID: Rep_2978_c_16_37
Type: pfam
Location: 37016 - 37525 (-)
Type: pfam
Location: 37016 - 37525 (-)
Gene ID: Rep_2978_c_16_38
Type: TF
Location: 37636 - 38019 (+)
Type: TF
Location: 37636 - 38019 (+)
Gene ID: Rep_2978_c_16_39
Type: TC
Location: 38012 - 38917 (+)
Type: TC
Location: 38012 - 38917 (+)
Gene ID: Rep_2978_c_16_40
Type:
Location: 38914 - 40986 (+)
Type:
Location: 38914 - 40986 (+)
Gene ID: Rep_2978_c_16_41
Type: CAZyme
Location: 41042 - 43438 (-)
Type: CAZyme
Location: 41042 - 43438 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp900549155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.