Cluster: Rep_2978_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2978
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2978_c_10 | Rep_2978_c_10_26 | 27056 | 28654 | - | GH13_31 |
| TC | Rep_2978_c_10 | Rep_2978_c_10_27 | 28740 | 30128 | - | 2.A.66.1.32 |
| TC | Rep_2978_c_10 | Rep_2978_c_10_28 | 30246 | 31067 | - | 3.A.1.132.3 |
| TC | Rep_2978_c_10 | Rep_2978_c_10_29 | 31098 | 31796 | - | 9.B.18.1.3 |
| pfam | Rep_2978_c_10 | Rep_2978_c_10_30 | 32044 | 33939 | + | CN_hydrolase | NAD_synthase |
| NULL(UNKNOWN) | Rep_2978_c_10 | Rep_2978_c_10_31 | 33952 | 34452 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2978_c_10 | Rep_2978_c_10_32 | 34803 | 40895 | - | CBM67 | GH78 |
Gene ID: Rep_2978_c_10_26
Type: CAZyme
Location: 27056 - 28654 (-)
Type: CAZyme
Location: 27056 - 28654 (-)
Gene ID: Rep_2978_c_10_27
Type: TC
Location: 28740 - 30128 (-)
Type: TC
Location: 28740 - 30128 (-)
Gene ID: Rep_2978_c_10_28
Type: TC
Location: 30246 - 31067 (-)
Type: TC
Location: 30246 - 31067 (-)
Gene ID: Rep_2978_c_10_29
Type: TC
Location: 31098 - 31796 (-)
Type: TC
Location: 31098 - 31796 (-)
Gene ID: Rep_2978_c_10_30
Type: pfam
Location: 32044 - 33939 (+)
Type: pfam
Location: 32044 - 33939 (+)
Gene ID: Rep_2978_c_10_31
Type:
Location: 33952 - 34452 (+)
Type:
Location: 33952 - 34452 (+)
Gene ID: Rep_2978_c_10_32
Type: CAZyme
Location: 34803 - 40895 (-)
Type: CAZyme
Location: 34803 - 40895 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp900549155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.