Cluster: Rep_2978_CGC10
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 8
- Substrate:
- Genome ID: Rep_2978
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2978_c_6 | Rep_2978_c_6_14 | 17096 | 18454 | - | GH112 |
| pfam | Rep_2978_c_6 | Rep_2978_c_6_15 | 18823 | 20052 | + | AAA_14 | DUF4143 |
| CAZyme | Rep_2978_c_6 | Rep_2978_c_6_16 | 20307 | 22901 | - | GH3 |
| CAZyme | Rep_2978_c_6 | Rep_2978_c_6_17 | 22918 | 25116 | - | GH3 |
| CAZyme | Rep_2978_c_6 | Rep_2978_c_6_18 | 25134 | 27644 | - | GH31_15 |
| CAZyme | Rep_2978_c_6 | Rep_2978_c_6_19 | 27647 | 29686 | - | GH42 |
| peptidase | Rep_2978_c_6 | Rep_2978_c_6_20 | 29709 | 30536 | - | S09.UPW |
| pfam | Rep_2978_c_6 | Rep_2978_c_6_21 | 30578 | 31384 | - | Polysacc_deac_1 |
| CAZyme | Rep_2978_c_6 | Rep_2978_c_6_22 | 31471 | 34044 | - | GH106 |
| CAZyme | Rep_2978_c_6 | Rep_2978_c_6_23 | 34218 | 38987 | - | CE2 | CE2 |
| TC | Rep_2978_c_6 | Rep_2978_c_6_24 | 39079 | 40020 | - | 3.A.1.1.27 |
| TC | Rep_2978_c_6 | Rep_2978_c_6_25 | 40017 | 40898 | - | 3.A.1.1.25 |
| pfam | Rep_2978_c_6 | Rep_2978_c_6_26 | 40902 | 43178 | - | DUF5696 |
| NULL(UNKNOWN) | Rep_2978_c_6 | Rep_2978_c_6_27 | 43165 | 45234 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2978_c_6 | Rep_2978_c_6_28 | 45249 | 46094 | - | 3.A.1.1.39 |
| TC | Rep_2978_c_6 | Rep_2978_c_6_29 | 46141 | 47088 | - | 3.A.1.1.11 |
| STP | Rep_2978_c_6 | Rep_2978_c_6_30 | 47085 | 50018 | - | SBP_bac_1 |
| CAZyme | Rep_2978_c_6 | Rep_2978_c_6_31 | 50091 | 53417 | - | GH31 |
Gene ID: Rep_2978_c_6_14
Type: CAZyme
Location: 17096 - 18454 (-)
Type: CAZyme
Location: 17096 - 18454 (-)
Gene ID: Rep_2978_c_6_15
Type: pfam
Location: 18823 - 20052 (+)
Type: pfam
Location: 18823 - 20052 (+)
Gene ID: Rep_2978_c_6_16
Type: CAZyme
Location: 20307 - 22901 (-)
Type: CAZyme
Location: 20307 - 22901 (-)
Gene ID: Rep_2978_c_6_17
Type: CAZyme
Location: 22918 - 25116 (-)
Type: CAZyme
Location: 22918 - 25116 (-)
Gene ID: Rep_2978_c_6_18
Type: CAZyme
Location: 25134 - 27644 (-)
Type: CAZyme
Location: 25134 - 27644 (-)
Gene ID: Rep_2978_c_6_19
Type: CAZyme
Location: 27647 - 29686 (-)
Type: CAZyme
Location: 27647 - 29686 (-)
Gene ID: Rep_2978_c_6_20
Type: peptidase
Location: 29709 - 30536 (-)
Type: peptidase
Location: 29709 - 30536 (-)
Gene ID: Rep_2978_c_6_21
Type: pfam
Location: 30578 - 31384 (-)
Type: pfam
Location: 30578 - 31384 (-)
Gene ID: Rep_2978_c_6_22
Type: CAZyme
Location: 31471 - 34044 (-)
Type: CAZyme
Location: 31471 - 34044 (-)
Gene ID: Rep_2978_c_6_23
Type: CAZyme
Location: 34218 - 38987 (-)
Type: CAZyme
Location: 34218 - 38987 (-)
Gene ID: Rep_2978_c_6_24
Type: TC
Location: 39079 - 40020 (-)
Type: TC
Location: 39079 - 40020 (-)
Gene ID: Rep_2978_c_6_25
Type: TC
Location: 40017 - 40898 (-)
Type: TC
Location: 40017 - 40898 (-)
Gene ID: Rep_2978_c_6_26
Type: pfam
Location: 40902 - 43178 (-)
Type: pfam
Location: 40902 - 43178 (-)
Gene ID: Rep_2978_c_6_27
Type:
Location: 43165 - 45234 (-)
Type:
Location: 43165 - 45234 (-)
Gene ID: Rep_2978_c_6_28
Type: TC
Location: 45249 - 46094 (-)
Type: TC
Location: 45249 - 46094 (-)
Gene ID: Rep_2978_c_6_29
Type: TC
Location: 46141 - 47088 (-)
Type: TC
Location: 46141 - 47088 (-)
Gene ID: Rep_2978_c_6_30
Type: STP
Location: 47085 - 50018 (-)
Type: STP
Location: 47085 - 50018 (-)
Gene ID: Rep_2978_c_6_31
Type: CAZyme
Location: 50091 - 53417 (-)
Type: CAZyme
Location: 50091 - 53417 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp900549155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.