Cluster: Rep_2978_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2978
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2978_c_0 | Rep_2978_c_0_67 | 79097 | 80491 | + | 2.A.66.1.33 |
| pfam | Rep_2978_c_0 | Rep_2978_c_0_68 | 80504 | 81127 | - | DUF1643 |
| CAZyme | Rep_2978_c_0 | Rep_2978_c_0_69 | 81251 | 83521 | + | GH31_1 |
| pfam | Rep_2978_c_0 | Rep_2978_c_0_70 | 83570 | 83854 | - | Barstar |
| CAZyme | Rep_2978_c_0 | Rep_2978_c_0_71 | 83859 | 86969 | - | GH106 |
| TF | Rep_2978_c_0 | Rep_2978_c_0_72 | 87060 | 87899 | + | HTH_AraC |
| TC | Rep_2978_c_0 | Rep_2978_c_0_73 | 88126 | 88662 | - | 3.A.1.25.5 |
Gene ID: Rep_2978_c_0_67
Type: TC
Location: 79097 - 80491 (+)
Type: TC
Location: 79097 - 80491 (+)
Gene ID: Rep_2978_c_0_68
Type: pfam
Location: 80504 - 81127 (-)
Type: pfam
Location: 80504 - 81127 (-)
Gene ID: Rep_2978_c_0_69
Type: CAZyme
Location: 81251 - 83521 (+)
Type: CAZyme
Location: 81251 - 83521 (+)
Gene ID: Rep_2978_c_0_70
Type: pfam
Location: 83570 - 83854 (-)
Type: pfam
Location: 83570 - 83854 (-)
Gene ID: Rep_2978_c_0_71
Type: CAZyme
Location: 83859 - 86969 (-)
Type: CAZyme
Location: 83859 - 86969 (-)
Gene ID: Rep_2978_c_0_72
Type: TF
Location: 87060 - 87899 (+)
Type: TF
Location: 87060 - 87899 (+)
Gene ID: Rep_2978_c_0_73
Type: TC
Location: 88126 - 88662 (-)
Type: TC
Location: 88126 - 88662 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp900549155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.