Cluster: Rep_295_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_295
- CGC Family ID: CGCFAM_01074
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_295_c_52 | Rep_295_c_52_13 | 10542 | 12773 | - | GH3 |
| CAZyme | Rep_295_c_52 | Rep_295_c_52_14 | 12804 | 15314 | - | GH2 |
| CAZyme | Rep_295_c_52 | Rep_295_c_52_15 | 15431 | 18313 | - | GH31_4 |
| TF | Rep_295_c_52 | Rep_295_c_52_16 | 18502 | 22569 | - | HTH_AraC |
| TC | Rep_295_c_52 | Rep_295_c_52_17 | 23095 | 26355 | + | 1.B.14.6.1 |
Gene ID: Rep_295_c_52_13
Type: CAZyme
Location: 10542 - 12773 (-)
Type: CAZyme
Location: 10542 - 12773 (-)
Gene ID: Rep_295_c_52_14
Type: CAZyme
Location: 12804 - 15314 (-)
Type: CAZyme
Location: 12804 - 15314 (-)
Gene ID: Rep_295_c_52_15
Type: CAZyme
Location: 15431 - 18313 (-)
Type: CAZyme
Location: 15431 - 18313 (-)
Gene ID: Rep_295_c_52_16
Type: TF
Location: 18502 - 22569 (-)
Type: TF
Location: 18502 - 22569 (-)
Gene ID: Rep_295_c_52_17
Type: TC
Location: 23095 - 26355 (+)
Type: TC
Location: 23095 - 26355 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp910583795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.