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Cluster: Rep_295_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_295_c_268 Rep_295_c_268_10 7204 8598 + 2.A.66.1.32
NULL(UNKNOWN) Rep_295_c_268 Rep_295_c_268_11 8828 9808 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_295_c_268 Rep_295_c_268_12 9817 11841 + 3.D.10.1.5
TC Rep_295_c_268 Rep_295_c_268_13 11868 12626 + 3.D.10.1.5
CAZyme Rep_295_c_268 Rep_295_c_268_14 12713 13549 + GT2
pfam Rep_295_c_268 Rep_295_c_268_15 13534 14133 - DUF4230
pfam Rep_295_c_268 Rep_295_c_268_16 14147 14758 - DUF4230
CAZyme Rep_295_c_268 Rep_295_c_268_17 14875 15963 - GT4
Gene ID: Rep_295_c_268_10
Type: TC
Location: 7204 - 8598 (+)
Gene ID: Rep_295_c_268_11
Type:
Location: 8828 - 9808 (+)
Gene ID: Rep_295_c_268_12
Type: TC
Location: 9817 - 11841 (+)
Gene ID: Rep_295_c_268_13
Type: TC
Location: 11868 - 12626 (+)
Gene ID: Rep_295_c_268_14
Type: CAZyme
Location: 12713 - 13549 (+)
Gene ID: Rep_295_c_268_15
Type: pfam
Location: 13534 - 14133 (-)
Gene ID: Rep_295_c_268_16
Type: pfam
Location: 14147 - 14758 (-)
Gene ID: Rep_295_c_268_17
Type: CAZyme
Location: 14875 - 15963 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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