Cluster: Rep_295_CGC19
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 8
- Substrate: host glycan
- Genome ID: Rep_295
- CGC Family ID: CGCFAM_00016
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_295_c_172 | Rep_295_c_172_8 | 9067 | 12441 | + | 1.B.14.6.13 |
| TC | Rep_295_c_172 | Rep_295_c_172_9 | 12453 | 14027 | + | 8.A.46.2.2 |
| pfam | Rep_295_c_172 | Rep_295_c_172_10 | 14066 | 15058 | + | GH18_BT1044-like |
| pfam | Rep_295_c_172 | Rep_295_c_172_11 | 15087 | 16247 | + | BT_3987-like_N | Laminin_G_3 | DUF4973 |
| CAZyme | Rep_295_c_172 | Rep_295_c_172_12 | 16289 | 17728 | + | GH18 |
| NULL(UNKNOWN) | Rep_295_c_172 | Rep_295_c_172_13 | 17866 | 18027 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_295_c_172 | Rep_295_c_172_14 | 18029 | 20278 | + | GH92 |
| CAZyme | Rep_295_c_172 | Rep_295_c_172_15 | 20308 | 22596 | + | GH92 |
| CAZyme | Rep_295_c_172 | Rep_295_c_172_16 | 22625 | 24928 | + | GH92 |
| pfam | Rep_295_c_172 | Rep_295_c_172_17 | 24925 | 26295 | + | MFS_1 |
| CAZyme | Rep_295_c_172 | Rep_295_c_172_18 | 26324 | 27289 | + | GH130_2 |
| CAZyme | Rep_295_c_172 | Rep_295_c_172_19 | 27291 | 29549 | + | GH92 |
| CAZyme | Rep_295_c_172 | Rep_295_c_172_20 | 29536 | 31524 | + | GH97 |
| CAZyme | Rep_295_c_172 | Rep_295_c_172_21 | 31694 | 33931 | - | GH31_16 |
Gene ID: Rep_295_c_172_8
Type: TC
Location: 9067 - 12441 (+)
Type: TC
Location: 9067 - 12441 (+)
Gene ID: Rep_295_c_172_9
Type: TC
Location: 12453 - 14027 (+)
Type: TC
Location: 12453 - 14027 (+)
Gene ID: Rep_295_c_172_10
Type: pfam
Location: 14066 - 15058 (+)
Type: pfam
Location: 14066 - 15058 (+)
Gene ID: Rep_295_c_172_11
Type: pfam
Location: 15087 - 16247 (+)
Type: pfam
Location: 15087 - 16247 (+)
Gene ID: Rep_295_c_172_12
Type: CAZyme
Location: 16289 - 17728 (+)
Type: CAZyme
Location: 16289 - 17728 (+)
Gene ID: Rep_295_c_172_13
Type:
Location: 17866 - 18027 (+)
Type:
Location: 17866 - 18027 (+)
Gene ID: Rep_295_c_172_14
Type: CAZyme
Location: 18029 - 20278 (+)
Type: CAZyme
Location: 18029 - 20278 (+)
Gene ID: Rep_295_c_172_15
Type: CAZyme
Location: 20308 - 22596 (+)
Type: CAZyme
Location: 20308 - 22596 (+)
Gene ID: Rep_295_c_172_16
Type: CAZyme
Location: 22625 - 24928 (+)
Type: CAZyme
Location: 22625 - 24928 (+)
Gene ID: Rep_295_c_172_17
Type: pfam
Location: 24925 - 26295 (+)
Type: pfam
Location: 24925 - 26295 (+)
Gene ID: Rep_295_c_172_18
Type: CAZyme
Location: 26324 - 27289 (+)
Type: CAZyme
Location: 26324 - 27289 (+)
Gene ID: Rep_295_c_172_19
Type: CAZyme
Location: 27291 - 29549 (+)
Type: CAZyme
Location: 27291 - 29549 (+)
Gene ID: Rep_295_c_172_20
Type: CAZyme
Location: 29536 - 31524 (+)
Type: CAZyme
Location: 29536 - 31524 (+)
Gene ID: Rep_295_c_172_21
Type: CAZyme
Location: 31694 - 33931 (-)
Type: CAZyme
Location: 31694 - 33931 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp910583795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.