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Cluster: Rep_295_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_295_c_145 Rep_295_c_145_2 1071 4616 - GH2
CAZyme Rep_295_c_145 Rep_295_c_145_3 4622 6079 - CBM32 | GH29
TC Rep_295_c_145 Rep_295_c_145_4 6458 9628 + 1.B.14.6.1
pfam Rep_295_c_145 Rep_295_c_145_5 9642 11315 + SusD_RagB | SusD-like_3
CAZyme Rep_295_c_145 Rep_295_c_145_6 11334 12293 + CBM32
pfam Rep_295_c_145 Rep_295_c_145_7 12446 15094 - Kelch_3 | Kelch_4 | Kelch_KLHDC2_KLHL20_DRC7
CAZyme Rep_295_c_145 Rep_295_c_145_8 15171 16064 - GH16_3
Gene ID: Rep_295_c_145_2
Type: CAZyme
Location: 1071 - 4616 (-)
Gene ID: Rep_295_c_145_3
Type: CAZyme
Location: 4622 - 6079 (-)
Gene ID: Rep_295_c_145_4
Type: TC
Location: 6458 - 9628 (+)
Gene ID: Rep_295_c_145_5
Type: pfam
Location: 9642 - 11315 (+)
Gene ID: Rep_295_c_145_6
Type: CAZyme
Location: 11334 - 12293 (+)
Gene ID: Rep_295_c_145_7
Type: pfam
Location: 12446 - 15094 (-)
Gene ID: Rep_295_c_145_8
Type: CAZyme
Location: 15171 - 16064 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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