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Cluster: Rep_295_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_295_c_21 Rep_295_c_21_21 24580 26181 - GH115
pfam Rep_295_c_21 Rep_295_c_21_22 26121 26888 - Glyco_hydro_115
CAZyme Rep_295_c_21 Rep_295_c_21_23 26933 28855 - GH43_24
CAZyme Rep_295_c_21 Rep_295_c_21_24 28941 30902 - PL27
pfam Rep_295_c_21 Rep_295_c_21_25 30942 32408 - Glyco_hydro_42 | DUF4978
CAZyme Rep_295_c_21 Rep_295_c_21_26 32467 34017 - GH43_9
pfam Rep_295_c_21 Rep_295_c_21_27 34177 36207 - SusD_RagB | SusD-like_3
TC Rep_295_c_21 Rep_295_c_21_28 36221 39652 - 1.B.14.6.1
Gene ID: Rep_295_c_21_21
Type: CAZyme
Location: 24580 - 26181 (-)
Gene ID: Rep_295_c_21_22
Type: pfam
Location: 26121 - 26888 (-)
Gene ID: Rep_295_c_21_23
Type: CAZyme
Location: 26933 - 28855 (-)
Gene ID: Rep_295_c_21_24
Type: CAZyme
Location: 28941 - 30902 (-)
Gene ID: Rep_295_c_21_25
Type: pfam
Location: 30942 - 32408 (-)
Gene ID: Rep_295_c_21_26
Type: CAZyme
Location: 32467 - 34017 (-)
Gene ID: Rep_295_c_21_27
Type: pfam
Location: 34177 - 36207 (-)
Gene ID: Rep_295_c_21_28
Type: TC
Location: 36221 - 39652 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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