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Cluster: Rep_2952_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2952_c_4 Rep_2952_c_4_16 21767 22525 - 3.A.1.103.1
TC Rep_2952_c_4 Rep_2952_c_4_17 22515 23324 - 3.A.1.104.1
pfam Rep_2952_c_4 Rep_2952_c_4_18 23711 26470 - DEAD | Helicase_C | ResIII | AEP-TOTE
TC Rep_2952_c_4 Rep_2952_c_4_19 26681 27826 - 9.B.146.1.1
CAZyme Rep_2952_c_4 Rep_2952_c_4_20 27843 30155 - GH73
Gene ID: Rep_2952_c_4_16
Type: TC
Location: 21767 - 22525 (-)
Gene ID: Rep_2952_c_4_17
Type: TC
Location: 22515 - 23324 (-)
Gene ID: Rep_2952_c_4_18
Type: pfam
Location: 23711 - 26470 (-)
Gene ID: Rep_2952_c_4_19
Type: TC
Location: 26681 - 27826 (-)
Gene ID: Rep_2952_c_4_20
Type: CAZyme
Location: 27843 - 30155 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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