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Cluster: Rep_293_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_293_c_15 Rep_293_c_15_27 30539 32539 - GH97
pfam Rep_293_c_15 Rep_293_c_15_28 33355 33816 + RseC_MucC
TC Rep_293_c_15 Rep_293_c_15_29 33890 34705 + 3.D.6.1.3
TC Rep_293_c_15 Rep_293_c_15_30 34702 36015 + 3.D.6.1.2
TC Rep_293_c_15 Rep_293_c_15_31 36018 36998 + 3.D.6.1.2
TC Rep_293_c_15 Rep_293_c_15_32 36995 37603 + 3.D.6.1.3
TC Rep_293_c_15 Rep_293_c_15_33 37600 38190 + 3.D.6.1.2
TC Rep_293_c_15 Rep_293_c_15_34 38196 38774 + 3.D.6.1.2
Gene ID: Rep_293_c_15_27
Type: CAZyme
Location: 30539 - 32539 (-)
Gene ID: Rep_293_c_15_28
Type: pfam
Location: 33355 - 33816 (+)
Gene ID: Rep_293_c_15_29
Type: TC
Location: 33890 - 34705 (+)
Gene ID: Rep_293_c_15_30
Type: TC
Location: 34702 - 36015 (+)
Gene ID: Rep_293_c_15_31
Type: TC
Location: 36018 - 36998 (+)
Gene ID: Rep_293_c_15_32
Type: TC
Location: 36995 - 37603 (+)
Gene ID: Rep_293_c_15_33
Type: TC
Location: 37600 - 38190 (+)
Gene ID: Rep_293_c_15_34
Type: TC
Location: 38196 - 38774 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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