Cluster: Rep_293_CGC58
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_293
- CGC Family ID: CGCFAM_00320
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_293_c_151 | Rep_293_c_151_1 | 130 | 1797 | - | 8.A.46.1.5 |
| TC | Rep_293_c_151 | Rep_293_c_151_2 | 1817 | 4897 | - | 1.B.14.6.1 |
| CAZyme | Rep_293_c_151 | Rep_293_c_151_3 | 4928 | 6562 | - | GH29 |
| CAZyme | Rep_293_c_151 | Rep_293_c_151_4 | 7077 | 9419 | + | GH133 |
| CAZyme | Rep_293_c_151 | Rep_293_c_151_5 | 9748 | 12207 | - | GH31_4 |
| pfam | Rep_293_c_151 | Rep_293_c_151_6 | 12220 | 12636 | - | rhaM |
| pfam | Rep_293_c_151 | Rep_293_c_151_7 | 12645 | 13664 | - | ADH_zinc_N | AlaDh_PNT_C | ADH_N |
| CAZyme | Rep_293_c_151 | Rep_293_c_151_8 | 13661 | 15532 | - | GH97 |
| TC | Rep_293_c_151 | Rep_293_c_151_9 | 15535 | 16824 | - | 2.A.1.7.1 |
| pfam | Rep_293_c_151 | Rep_293_c_151_10 | 16821 | 17750 | - | Amidohydro_2 |
| TC | Rep_293_c_151 | Rep_293_c_151_11 | 17764 | 18666 | - | 8.A.5.1.6 |
| TF | Rep_293_c_151 | Rep_293_c_151_12 | 18919 | 19758 | + | HTH_AraC | HTH_AraC |
| TC | Rep_293_c_151 | Rep_293_c_151_13 | 19814 | 20599 | - | 2.A.47.4.8 |
| pfam | Rep_293_c_151 | Rep_293_c_151_14 | 20851 | 21777 | + | WYL |
| CAZyme | Rep_293_c_151 | Rep_293_c_151_15 | 21781 | 22791 | - | GH43_24 |
Gene ID: Rep_293_c_151_1
Type: TC
Location: 130 - 1797 (-)
Type: TC
Location: 130 - 1797 (-)
Gene ID: Rep_293_c_151_2
Type: TC
Location: 1817 - 4897 (-)
Type: TC
Location: 1817 - 4897 (-)
Gene ID: Rep_293_c_151_3
Type: CAZyme
Location: 4928 - 6562 (-)
Type: CAZyme
Location: 4928 - 6562 (-)
Gene ID: Rep_293_c_151_4
Type: CAZyme
Location: 7077 - 9419 (+)
Type: CAZyme
Location: 7077 - 9419 (+)
Gene ID: Rep_293_c_151_5
Type: CAZyme
Location: 9748 - 12207 (-)
Type: CAZyme
Location: 9748 - 12207 (-)
Gene ID: Rep_293_c_151_6
Type: pfam
Location: 12220 - 12636 (-)
Type: pfam
Location: 12220 - 12636 (-)
Gene ID: Rep_293_c_151_7
Type: pfam
Location: 12645 - 13664 (-)
Type: pfam
Location: 12645 - 13664 (-)
Gene ID: Rep_293_c_151_8
Type: CAZyme
Location: 13661 - 15532 (-)
Type: CAZyme
Location: 13661 - 15532 (-)
Gene ID: Rep_293_c_151_9
Type: TC
Location: 15535 - 16824 (-)
Type: TC
Location: 15535 - 16824 (-)
Gene ID: Rep_293_c_151_10
Type: pfam
Location: 16821 - 17750 (-)
Type: pfam
Location: 16821 - 17750 (-)
Gene ID: Rep_293_c_151_11
Type: TC
Location: 17764 - 18666 (-)
Type: TC
Location: 17764 - 18666 (-)
Gene ID: Rep_293_c_151_12
Type: TF
Location: 18919 - 19758 (+)
Type: TF
Location: 18919 - 19758 (+)
Gene ID: Rep_293_c_151_13
Type: TC
Location: 19814 - 20599 (-)
Type: TC
Location: 19814 - 20599 (-)
Gene ID: Rep_293_c_151_14
Type: pfam
Location: 20851 - 21777 (+)
Type: pfam
Location: 20851 - 21777 (+)
Gene ID: Rep_293_c_151_15
Type: CAZyme
Location: 21781 - 22791 (-)
Type: CAZyme
Location: 21781 - 22791 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp910588245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.