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Cluster: Rep_293_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_293_c_131 Rep_293_c_131_41 55679 56377 - 3.A.1.23.2
pfam Rep_293_c_131 Rep_293_c_131_42 56380 57171 - CbiQ
TC Rep_293_c_131 Rep_293_c_131_43 57192 58217 - 3.A.1.23.5
pfam Rep_293_c_131 Rep_293_c_131_44 58388 58840 + PepSY_like
TC Rep_293_c_131 Rep_293_c_131_45 58925 60226 - 2.A.23.2.11
pfam Rep_293_c_131 Rep_293_c_131_46 60249 61373 - Beta_elim_lyase
CAZyme Rep_293_c_131 Rep_293_c_131_47 61508 62542 + GH53
NULL(UNKNOWN) Rep_293_c_131 Rep_293_c_131_48 62693 62971 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_293_c_131 Rep_293_c_131_49 63075 64097 + 9.A.40.2.4
Gene ID: Rep_293_c_131_41
Type: TC
Location: 55679 - 56377 (-)
Gene ID: Rep_293_c_131_42
Type: pfam
Location: 56380 - 57171 (-)
Gene ID: Rep_293_c_131_43
Type: TC
Location: 57192 - 58217 (-)
Gene ID: Rep_293_c_131_44
Type: pfam
Location: 58388 - 58840 (+)
Gene ID: Rep_293_c_131_45
Type: TC
Location: 58925 - 60226 (-)
Gene ID: Rep_293_c_131_46
Type: pfam
Location: 60249 - 61373 (-)
Gene ID: Rep_293_c_131_47
Type: CAZyme
Location: 61508 - 62542 (+)
Gene ID: Rep_293_c_131_48
Type:
Location: 62693 - 62971 (+)
Gene ID: Rep_293_c_131_49
Type: TC
Location: 63075 - 64097 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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