Cluster: Rep_293_CGC43
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: fructan
- Genome ID: Rep_293
- CGC Family ID: CGCFAM_00017
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_293_c_114 | Rep_293_c_114_1 | 408 | 1592 | - | 2.A.1.7.17 |
| CAZyme | Rep_293_c_114 | Rep_293_c_114_2 | 1630 | 3459 | - | GH32 |
| TF | Rep_293_c_114 | Rep_293_c_114_3 | 3778 | 6510 | + | HTH_AraC |
| TC | Rep_293_c_114 | Rep_293_c_114_4 | 6738 | 9857 | + | 1.B.14.6.1 |
| pfam | Rep_293_c_114 | Rep_293_c_114_5 | 9887 | 11623 | + | SusD_RagB | SusD-like_3 |
| pfam | Rep_293_c_114 | Rep_293_c_114_6 | 11676 | 13178 | + | DUF4960 |
| CAZyme | Rep_293_c_114 | Rep_293_c_114_7 | 13192 | 14706 | + | GH32 |
Gene ID: Rep_293_c_114_1
Type: TC
Location: 408 - 1592 (-)
Type: TC
Location: 408 - 1592 (-)
Gene ID: Rep_293_c_114_2
Type: CAZyme
Location: 1630 - 3459 (-)
Type: CAZyme
Location: 1630 - 3459 (-)
Gene ID: Rep_293_c_114_3
Type: TF
Location: 3778 - 6510 (+)
Type: TF
Location: 3778 - 6510 (+)
Gene ID: Rep_293_c_114_4
Type: TC
Location: 6738 - 9857 (+)
Type: TC
Location: 6738 - 9857 (+)
Gene ID: Rep_293_c_114_5
Type: pfam
Location: 9887 - 11623 (+)
Type: pfam
Location: 9887 - 11623 (+)
Gene ID: Rep_293_c_114_6
Type: pfam
Location: 11676 - 13178 (+)
Type: pfam
Location: 11676 - 13178 (+)
Gene ID: Rep_293_c_114_7
Type: CAZyme
Location: 13192 - 14706 (+)
Type: CAZyme
Location: 13192 - 14706 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp910588245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.