Cluster: Rep_293_CGC41
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_293
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_293_c_111 | Rep_293_c_111_39 | 45692 | 48934 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | Rep_293_c_111 | Rep_293_c_111_40 | 49372 | 49734 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_293_c_111 | Rep_293_c_111_41 | 49787 | 49957 | + | HTH_AraC |
| TC | Rep_293_c_111 | Rep_293_c_111_42 | 50008 | 51330 | - | 2.A.1.25.5 |
| pfam | Rep_293_c_111 | Rep_293_c_111_43 | 51352 | 52257 | - | DUF4922 |
| CAZyme | Rep_293_c_111 | Rep_293_c_111_44 | 52241 | 53584 | - | GT2 |
| NULL(UNKNOWN) | Rep_293_c_111 | Rep_293_c_111_45 | 53607 | 56951 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_293_c_111 | Rep_293_c_111_46 | 57243 | 58892 | + | Fumerase | Fumerase_C |
| CAZyme | Rep_293_c_111 | Rep_293_c_111_47 | 59157 | 61544 | + | GH35 |
| CAZyme | Rep_293_c_111 | Rep_293_c_111_48 | 61725 | 64097 | - | GH146 |
| TC | Rep_293_c_111 | Rep_293_c_111_49 | 64324 | 65217 | - | 2.A.4.7.2 |
| STP | Rep_293_c_111 | Rep_293_c_111_50 | 65307 | 65666 | + | Rhodanese |
| STP | Rep_293_c_111 | Rep_293_c_111_51 | 65749 | 66501 | - | Nitroreductase |
| CAZyme | Rep_293_c_111 | Rep_293_c_111_52 | 66952 | 70047 | - | GH2 |
Gene ID: Rep_293_c_111_39
Type: TC
Location: 45692 - 48934 (-)
Type: TC
Location: 45692 - 48934 (-)
Gene ID: Rep_293_c_111_40
Type:
Location: 49372 - 49734 (-)
Type:
Location: 49372 - 49734 (-)
Gene ID: Rep_293_c_111_41
Type: TF
Location: 49787 - 49957 (+)
Type: TF
Location: 49787 - 49957 (+)
Gene ID: Rep_293_c_111_42
Type: TC
Location: 50008 - 51330 (-)
Type: TC
Location: 50008 - 51330 (-)
Gene ID: Rep_293_c_111_43
Type: pfam
Location: 51352 - 52257 (-)
Type: pfam
Location: 51352 - 52257 (-)
Gene ID: Rep_293_c_111_44
Type: CAZyme
Location: 52241 - 53584 (-)
Type: CAZyme
Location: 52241 - 53584 (-)
Gene ID: Rep_293_c_111_45
Type:
Location: 53607 - 56951 (-)
Type:
Location: 53607 - 56951 (-)
Gene ID: Rep_293_c_111_46
Type: pfam
Location: 57243 - 58892 (+)
Type: pfam
Location: 57243 - 58892 (+)
Gene ID: Rep_293_c_111_47
Type: CAZyme
Location: 59157 - 61544 (+)
Type: CAZyme
Location: 59157 - 61544 (+)
Gene ID: Rep_293_c_111_48
Type: CAZyme
Location: 61725 - 64097 (-)
Type: CAZyme
Location: 61725 - 64097 (-)
Gene ID: Rep_293_c_111_49
Type: TC
Location: 64324 - 65217 (-)
Type: TC
Location: 64324 - 65217 (-)
Gene ID: Rep_293_c_111_50
Type: STP
Location: 65307 - 65666 (+)
Type: STP
Location: 65307 - 65666 (+)
Gene ID: Rep_293_c_111_51
Type: STP
Location: 65749 - 66501 (-)
Type: STP
Location: 65749 - 66501 (-)
Gene ID: Rep_293_c_111_52
Type: CAZyme
Location: 66952 - 70047 (-)
Type: CAZyme
Location: 66952 - 70047 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp910588245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.