Cluster: Rep_293_CGC40
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 8
- Substrate:
- Genome ID: Rep_293
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_293_c_110 | Rep_293_c_110_3 | 4005 | 7310 | - | 1.B.14.6.1 |
| CAZyme | Rep_293_c_110 | Rep_293_c_110_4 | 7341 | 8564 | - | CBM32 |
| TF | Rep_293_c_110 | Rep_293_c_110_5 | 8618 | 9118 | - | GerE |
| CAZyme | Rep_293_c_110 | Rep_293_c_110_6 | 9581 | 12682 | - | GH2 |
| TF | Rep_293_c_110 | Rep_293_c_110_7 | 12755 | 15625 | - | HTH_AraC |
| CAZyme | Rep_293_c_110 | Rep_293_c_110_8 | 15628 | 16881 | - | GH88 |
| CAZyme | Rep_293_c_110 | Rep_293_c_110_9 | 16937 | 18370 | - | GH30_2 |
| CAZyme | Rep_293_c_110 | Rep_293_c_110_10 | 18392 | 20875 | - | GH51_2 |
| CAZyme | Rep_293_c_110 | Rep_293_c_110_11 | 20902 | 22500 | - | CBM91 | GH43_10 |
| CAZyme | Rep_293_c_110 | Rep_293_c_110_12 | 22763 | 24025 | - | GH5_46 |
| NULL(UNKNOWN) | Rep_293_c_110 | Rep_293_c_110_13 | 24168 | 25547 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_293_c_110 | Rep_293_c_110_14 | 25611 | 27164 | - | SusD_RagB |
| TC | Rep_293_c_110 | Rep_293_c_110_15 | 27190 | 30372 | - | 1.B.14.6.1 |
| CAZyme | Rep_293_c_110 | Rep_293_c_110_16 | 30736 | 32109 | - | GH16_3 |
Gene ID: Rep_293_c_110_3
Type: TC
Location: 4005 - 7310 (-)
Type: TC
Location: 4005 - 7310 (-)
Gene ID: Rep_293_c_110_4
Type: CAZyme
Location: 7341 - 8564 (-)
Type: CAZyme
Location: 7341 - 8564 (-)
Gene ID: Rep_293_c_110_5
Type: TF
Location: 8618 - 9118 (-)
Type: TF
Location: 8618 - 9118 (-)
Gene ID: Rep_293_c_110_6
Type: CAZyme
Location: 9581 - 12682 (-)
Type: CAZyme
Location: 9581 - 12682 (-)
Gene ID: Rep_293_c_110_7
Type: TF
Location: 12755 - 15625 (-)
Type: TF
Location: 12755 - 15625 (-)
Gene ID: Rep_293_c_110_8
Type: CAZyme
Location: 15628 - 16881 (-)
Type: CAZyme
Location: 15628 - 16881 (-)
Gene ID: Rep_293_c_110_9
Type: CAZyme
Location: 16937 - 18370 (-)
Type: CAZyme
Location: 16937 - 18370 (-)
Gene ID: Rep_293_c_110_10
Type: CAZyme
Location: 18392 - 20875 (-)
Type: CAZyme
Location: 18392 - 20875 (-)
Gene ID: Rep_293_c_110_11
Type: CAZyme
Location: 20902 - 22500 (-)
Type: CAZyme
Location: 20902 - 22500 (-)
Gene ID: Rep_293_c_110_12
Type: CAZyme
Location: 22763 - 24025 (-)
Type: CAZyme
Location: 22763 - 24025 (-)
Gene ID: Rep_293_c_110_13
Type:
Location: 24168 - 25547 (-)
Type:
Location: 24168 - 25547 (-)
Gene ID: Rep_293_c_110_14
Type: pfam
Location: 25611 - 27164 (-)
Type: pfam
Location: 25611 - 27164 (-)
Gene ID: Rep_293_c_110_15
Type: TC
Location: 27190 - 30372 (-)
Type: TC
Location: 27190 - 30372 (-)
Gene ID: Rep_293_c_110_16
Type: CAZyme
Location: 30736 - 32109 (-)
Type: CAZyme
Location: 30736 - 32109 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp910588245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.