Cluster: Rep_293_CGC38
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_293
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_293_c_102 | Rep_293_c_102_6 | 11362 | 12786 | + | GH26 |
| CAZyme | Rep_293_c_102 | Rep_293_c_102_7 | 12962 | 15400 | + | GH94 |
| CAZyme | Rep_293_c_102 | Rep_293_c_102_8 | 15432 | 16532 | + | GH26 |
| CAZyme | Rep_293_c_102 | Rep_293_c_102_9 | 16573 | 17745 | + | GH130_1 |
| TC | Rep_293_c_102 | Rep_293_c_102_10 | 17835 | 19286 | + | 2.A.2.3.5 |
| pfam | Rep_293_c_102 | Rep_293_c_102_11 | 19312 | 20505 | + | GlcNAc_2-epim |
| NULL(UNKNOWN) | Rep_293_c_102 | Rep_293_c_102_12 | 20708 | 20869 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_293_c_102 | Rep_293_c_102_13 | 20892 | 24119 | + | 1.B.14.6.1 |
| TC | Rep_293_c_102 | Rep_293_c_102_14 | 24158 | 25633 | + | 8.A.46.3.2 |
| pfam | Rep_293_c_102 | Rep_293_c_102_15 | 25723 | 27246 | - | GH3 | GH3_M | GH3_C |
| pfam | Rep_293_c_102 | Rep_293_c_102_16 | 27257 | 28102 | - | PLA1 |
| TC | Rep_293_c_102 | Rep_293_c_102_17 | 28397 | 29788 | + | 2.A.66.1.32 |
| pfam | Rep_293_c_102 | Rep_293_c_102_18 | 29823 | 31019 | + | Glycos_transf_2 | Glyco_tranf_2_3 |
| TC | Rep_293_c_102 | Rep_293_c_102_19 | 31117 | 32241 | - | 3.A.1.132.3 |
Gene ID: Rep_293_c_102_6
Type: CAZyme
Location: 11362 - 12786 (+)
Type: CAZyme
Location: 11362 - 12786 (+)
Gene ID: Rep_293_c_102_7
Type: CAZyme
Location: 12962 - 15400 (+)
Type: CAZyme
Location: 12962 - 15400 (+)
Gene ID: Rep_293_c_102_8
Type: CAZyme
Location: 15432 - 16532 (+)
Type: CAZyme
Location: 15432 - 16532 (+)
Gene ID: Rep_293_c_102_9
Type: CAZyme
Location: 16573 - 17745 (+)
Type: CAZyme
Location: 16573 - 17745 (+)
Gene ID: Rep_293_c_102_10
Type: TC
Location: 17835 - 19286 (+)
Type: TC
Location: 17835 - 19286 (+)
Gene ID: Rep_293_c_102_11
Type: pfam
Location: 19312 - 20505 (+)
Type: pfam
Location: 19312 - 20505 (+)
Gene ID: Rep_293_c_102_12
Type:
Location: 20708 - 20869 (+)
Type:
Location: 20708 - 20869 (+)
Gene ID: Rep_293_c_102_13
Type: TC
Location: 20892 - 24119 (+)
Type: TC
Location: 20892 - 24119 (+)
Gene ID: Rep_293_c_102_14
Type: TC
Location: 24158 - 25633 (+)
Type: TC
Location: 24158 - 25633 (+)
Gene ID: Rep_293_c_102_15
Type: pfam
Location: 25723 - 27246 (-)
Type: pfam
Location: 25723 - 27246 (-)
Gene ID: Rep_293_c_102_16
Type: pfam
Location: 27257 - 28102 (-)
Type: pfam
Location: 27257 - 28102 (-)
Gene ID: Rep_293_c_102_17
Type: TC
Location: 28397 - 29788 (+)
Type: TC
Location: 28397 - 29788 (+)
Gene ID: Rep_293_c_102_18
Type: pfam
Location: 29823 - 31019 (+)
Type: pfam
Location: 29823 - 31019 (+)
Gene ID: Rep_293_c_102_19
Type: TC
Location: 31117 - 32241 (-)
Type: TC
Location: 31117 - 32241 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp910588245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.