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Cluster: Rep_293_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_293_c_98 Rep_293_c_98_6 7417 8085 + 2.A.115.2.14
NULL(UNKNOWN) Rep_293_c_98 Rep_293_c_98_7 7943 8545 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_293_c_98 Rep_293_c_98_8 8555 9985 + Virul_fac_BrkB
CAZyme Rep_293_c_98 Rep_293_c_98_9 10314 12287 + GH133
CAZyme Rep_293_c_98 Rep_293_c_98_10 12296 13549 + GT4
CAZyme Rep_293_c_98 Rep_293_c_98_11 13613 15043 + GH57
CAZyme Rep_293_c_98 Rep_293_c_98_12 15204 17879 - GH28 | GH43_24
Gene ID: Rep_293_c_98_6
Type: TC
Location: 7417 - 8085 (+)
Gene ID: Rep_293_c_98_7
Type:
Location: 7943 - 8545 (-)
Gene ID: Rep_293_c_98_8
Type: pfam
Location: 8555 - 9985 (+)
Gene ID: Rep_293_c_98_9
Type: CAZyme
Location: 10314 - 12287 (+)
Gene ID: Rep_293_c_98_10
Type: CAZyme
Location: 12296 - 13549 (+)
Gene ID: Rep_293_c_98_11
Type: CAZyme
Location: 13613 - 15043 (+)
Gene ID: Rep_293_c_98_12
Type: CAZyme
Location: 15204 - 17879 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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