Cluster: Rep_293_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_293
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_293_c_24 | Rep_293_c_24_16 | 15943 | 18063 | + | 2.A.16.2.2 |
| pfam | Rep_293_c_24 | Rep_293_c_24_17 | 18500 | 19588 | + | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd |
| CAZyme | Rep_293_c_24 | Rep_293_c_24_18 | 19811 | 21379 | + | GH30_4 |
| CAZyme | Rep_293_c_24 | Rep_293_c_24_19 | 21626 | 23959 | + | GH115 |
Gene ID: Rep_293_c_24_16
Type: TC
Location: 15943 - 18063 (+)
Type: TC
Location: 15943 - 18063 (+)
Gene ID: Rep_293_c_24_17
Type: pfam
Location: 18500 - 19588 (+)
Type: pfam
Location: 18500 - 19588 (+)
Gene ID: Rep_293_c_24_18
Type: CAZyme
Location: 19811 - 21379 (+)
Type: CAZyme
Location: 19811 - 21379 (+)
Gene ID: Rep_293_c_24_19
Type: CAZyme
Location: 21626 - 23959 (+)
Type: CAZyme
Location: 21626 - 23959 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp910588245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.