Cluster: Rep_2939_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2939
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2939_c_1 | Rep_2939_c_1_23 | 24733 | 25854 | + | CE9 |
| STP | Rep_2939_c_1 | Rep_2939_c_1_24 | 26012 | 26599 | - | TetR_N |
| NULL(UNKNOWN) | Rep_2939_c_1 | Rep_2939_c_1_25 | 26844 | 27326 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2939_c_1 | Rep_2939_c_1_26 | 27761 | 29233 | + | 3.D.4.3.2 |
| TC | Rep_2939_c_1 | Rep_2939_c_1_27 | 29237 | 30292 | + | 3.D.4.3.2 |
Gene ID: Rep_2939_c_1_23
Type: CAZyme
Location: 24733 - 25854 (+)
Type: CAZyme
Location: 24733 - 25854 (+)
Gene ID: Rep_2939_c_1_24
Type: STP
Location: 26012 - 26599 (-)
Type: STP
Location: 26012 - 26599 (-)
Gene ID: Rep_2939_c_1_25
Type:
Location: 26844 - 27326 (+)
Type:
Location: 26844 - 27326 (+)
Gene ID: Rep_2939_c_1_26
Type: TC
Location: 27761 - 29233 (+)
Type: TC
Location: 27761 - 29233 (+)
Gene ID: Rep_2939_c_1_27
Type: TC
Location: 29237 - 30292 (+)
Type: TC
Location: 29237 - 30292 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Slackia
Species
Slackia piriformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.