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Cluster: Rep_2939_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2939_c_17 Rep_2939_c_17_6 4768 5403 - 4.F.1.1.7
TC Rep_2939_c_17 Rep_2939_c_17_7 5578 6018 - 3.D.1.4.2
TC Rep_2939_c_17 Rep_2939_c_17_8 6026 7114 - 3.D.1.4.2
pfam Rep_2939_c_17 Rep_2939_c_17_9 7117 7767 - Complex1_30kDa
TC Rep_2939_c_17 Rep_2939_c_17_10 7772 8218 - 3.D.1.4.2
TC Rep_2939_c_17 Rep_2939_c_17_11 8229 11090 - 3.D.1.4.2
pfam Rep_2939_c_17 Rep_2939_c_17_12 11311 11682 - 4HBT
CAZyme Rep_2939_c_17 Rep_2939_c_17_13 11787 13073 - GT28
Gene ID: Rep_2939_c_17_6
Type: TC
Location: 4768 - 5403 (-)
Gene ID: Rep_2939_c_17_7
Type: TC
Location: 5578 - 6018 (-)
Gene ID: Rep_2939_c_17_8
Type: TC
Location: 6026 - 7114 (-)
Gene ID: Rep_2939_c_17_9
Type: pfam
Location: 7117 - 7767 (-)
Gene ID: Rep_2939_c_17_10
Type: TC
Location: 7772 - 8218 (-)
Gene ID: Rep_2939_c_17_11
Type: TC
Location: 8229 - 11090 (-)
Gene ID: Rep_2939_c_17_12
Type: pfam
Location: 11311 - 11682 (-)
Gene ID: Rep_2939_c_17_13
Type: CAZyme
Location: 11787 - 13073 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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