Cluster: Rep_2939_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2939
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2939_c_0 | Rep_2939_c_0_89 | 108899 | 109462 | - | 2.A.107.1.2 |
| TC | Rep_2939_c_0 | Rep_2939_c_0_90 | 109459 | 110181 | - | 9.B.120.1.3 |
| TC | Rep_2939_c_0 | Rep_2939_c_0_91 | 110317 | 111708 | - | 2.A.1.21.22 |
| pfam | Rep_2939_c_0 | Rep_2939_c_0_92 | 111940 | 114099 | - | Helicase_C | UVR | ResIII | UvrB | UvrB_inter |
| CAZyme | Rep_2939_c_0 | Rep_2939_c_0_93 | 114321 | 116726 | - | GH3 |
Gene ID: Rep_2939_c_0_89
Type: TC
Location: 108899 - 109462 (-)
Type: TC
Location: 108899 - 109462 (-)
Gene ID: Rep_2939_c_0_90
Type: TC
Location: 109459 - 110181 (-)
Type: TC
Location: 109459 - 110181 (-)
Gene ID: Rep_2939_c_0_91
Type: TC
Location: 110317 - 111708 (-)
Type: TC
Location: 110317 - 111708 (-)
Gene ID: Rep_2939_c_0_92
Type: pfam
Location: 111940 - 114099 (-)
Type: pfam
Location: 111940 - 114099 (-)
Gene ID: Rep_2939_c_0_93
Type: CAZyme
Location: 114321 - 116726 (-)
Type: CAZyme
Location: 114321 - 116726 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Slackia
Species
Slackia piriformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.