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Cluster: Rep_2927_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2927_c_20 Rep_2927_c_20_3 1941 3554 - 2.A.33.1.2
pfam Rep_2927_c_20 Rep_2927_c_20_4 4002 4946 - DHH | DHHA2
STP Rep_2927_c_20 Rep_2927_c_20_5 5228 6184 - Glucokinase
TC Rep_2927_c_20 Rep_2927_c_20_6 6302 6607 - 4.A.3.2.8
TC Rep_2927_c_20 Rep_2927_c_20_7 6736 8061 - 2.A.26.1.2
pfam Rep_2927_c_20 Rep_2927_c_20_8 8209 9207 - Flg_new
CAZyme Rep_2927_c_20 Rep_2927_c_20_9 9247 12645 - GH84
CAZyme Rep_2927_c_20 Rep_2927_c_20_10 12914 17689 - CBM32 | GH20
TC Rep_2927_c_20 Rep_2927_c_20_11 19041 19400 + 9.B.55.2.2
Gene ID: Rep_2927_c_20_3
Type: TC
Location: 1941 - 3554 (-)
Gene ID: Rep_2927_c_20_4
Type: pfam
Location: 4002 - 4946 (-)
Gene ID: Rep_2927_c_20_5
Type: STP
Location: 5228 - 6184 (-)
Gene ID: Rep_2927_c_20_6
Type: TC
Location: 6302 - 6607 (-)
Gene ID: Rep_2927_c_20_7
Type: TC
Location: 6736 - 8061 (-)
Gene ID: Rep_2927_c_20_8
Type: pfam
Location: 8209 - 9207 (-)
Gene ID: Rep_2927_c_20_9
Type: CAZyme
Location: 9247 - 12645 (-)
Gene ID: Rep_2927_c_20_10
Type: CAZyme
Location: 12914 - 17689 (-)
Gene ID: Rep_2927_c_20_11
Type: TC
Location: 19041 - 19400 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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