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Cluster: Rep_2927_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2927_c_14 Rep_2927_c_14_1 342 1265 - 3.A.1.2.12
TC Rep_2927_c_14 Rep_2927_c_14_2 1258 2529 - 3.A.1.2.17
TC Rep_2927_c_14 Rep_2927_c_14_3 2531 4057 - 3.A.1.2.17
TC Rep_2927_c_14 Rep_2927_c_14_4 4239 5345 - 3.A.1.2.17
pfam Rep_2927_c_14 Rep_2927_c_14_5 5981 6700 - PNP_UDP_1
TC Rep_2927_c_14 Rep_2927_c_14_6 7329 8336 - 2.A.115.1.1
CAZyme Rep_2927_c_14 Rep_2927_c_14_7 8463 10874 - GH3
Gene ID: Rep_2927_c_14_1
Type: TC
Location: 342 - 1265 (-)
Gene ID: Rep_2927_c_14_2
Type: TC
Location: 1258 - 2529 (-)
Gene ID: Rep_2927_c_14_3
Type: TC
Location: 2531 - 4057 (-)
Gene ID: Rep_2927_c_14_4
Type: TC
Location: 4239 - 5345 (-)
Gene ID: Rep_2927_c_14_5
Type: pfam
Location: 5981 - 6700 (-)
Gene ID: Rep_2927_c_14_6
Type: TC
Location: 7329 - 8336 (-)
Gene ID: Rep_2927_c_14_7
Type: CAZyme
Location: 8463 - 10874 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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