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Cluster: Rep_2926_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2926_c_6 Rep_2926_c_6_11 10487 11542 - 9.B.18.2.1
NULL(UNKNOWN) Rep_2926_c_6 Rep_2926_c_6_12 11535 12926 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2926_c_6 Rep_2926_c_6_13 12916 14097 - GT4
CAZyme Rep_2926_c_6 Rep_2926_c_6_14 14195 15052 - GT32
CAZyme Rep_2926_c_6 Rep_2926_c_6_15 15045 16328 - GT4
CAZyme Rep_2926_c_6 Rep_2926_c_6_16 16325 16837 - GT4
pfam Rep_2926_c_6 Rep_2926_c_6_17 16904 17461 - DUF1972 | Glyco_transf_4 | Glyco_trans_4_2 | Glyco_trans_4_4
TC Rep_2926_c_6 Rep_2926_c_6_18 17462 18040 - 9.B.18.1.2
Gene ID: Rep_2926_c_6_11
Type: TC
Location: 10487 - 11542 (-)
Gene ID: Rep_2926_c_6_12
Type:
Location: 11535 - 12926 (-)
Gene ID: Rep_2926_c_6_13
Type: CAZyme
Location: 12916 - 14097 (-)
Gene ID: Rep_2926_c_6_14
Type: CAZyme
Location: 14195 - 15052 (-)
Gene ID: Rep_2926_c_6_15
Type: CAZyme
Location: 15045 - 16328 (-)
Gene ID: Rep_2926_c_6_16
Type: CAZyme
Location: 16325 - 16837 (-)
Gene ID: Rep_2926_c_6_17
Type: pfam
Location: 16904 - 17461 (-)
Gene ID: Rep_2926_c_6_18
Type: TC
Location: 17462 - 18040 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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