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Cluster: Rep_2926_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2926_c_27 Rep_2926_c_27_3 2356 3648 + 4.A.3.2.2
TC Rep_2926_c_27 Rep_2926_c_27_4 3677 4021 + 4.A.3.2.2
CAZyme Rep_2926_c_27 Rep_2926_c_27_5 4084 5526 + GH1
STP Rep_2926_c_27 Rep_2926_c_27_6 5608 5880 + PTS-HPr
TC Rep_2926_c_27 Rep_2926_c_27_7 5887 6555 + 2.A.115.2.13
pfam Rep_2926_c_27 Rep_2926_c_27_8 6695 7126 + Ribosomal_L31
TC Rep_2926_c_27 Rep_2926_c_27_9 7698 10673 + 3.A.5.1.3
pfam Rep_2926_c_27 Rep_2926_c_27_10 10673 11803 + RF-1 | PCRF
TC Rep_2926_c_27 Rep_2926_c_27_11 12113 13000 + 2.A.115.1.2
TC Rep_2926_c_27 Rep_2926_c_27_12 13216 14379 + 3.A.1.140.1
Gene ID: Rep_2926_c_27_3
Type: TC
Location: 2356 - 3648 (+)
Gene ID: Rep_2926_c_27_4
Type: TC
Location: 3677 - 4021 (+)
Gene ID: Rep_2926_c_27_5
Type: CAZyme
Location: 4084 - 5526 (+)
Gene ID: Rep_2926_c_27_6
Type: STP
Location: 5608 - 5880 (+)
Gene ID: Rep_2926_c_27_7
Type: TC
Location: 5887 - 6555 (+)
Gene ID: Rep_2926_c_27_8
Type: pfam
Location: 6695 - 7126 (+)
Gene ID: Rep_2926_c_27_9
Type: TC
Location: 7698 - 10673 (+)
Gene ID: Rep_2926_c_27_10
Type: pfam
Location: 10673 - 11803 (+)
Gene ID: Rep_2926_c_27_11
Type: TC
Location: 12113 - 13000 (+)
Gene ID: Rep_2926_c_27_12
Type: TC
Location: 13216 - 14379 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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