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Cluster: Rep_2926_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2926_c_26 Rep_2926_c_26_63 87344 88771 + GH1
CAZyme Rep_2926_c_26 Rep_2926_c_26_64 89400 90854 + GH1
pfam Rep_2926_c_26 Rep_2926_c_26_65 90854 91696 + Hydrolase_3
pfam Rep_2926_c_26 Rep_2926_c_26_66 92369 93202 + PRD | PRD | CAT_RBD
TC Rep_2926_c_26 Rep_2926_c_26_67 93386 94825 + 4.A.1.2.6
CAZyme Rep_2926_c_26 Rep_2926_c_26_68 94909 96363 + GH1
pfam Rep_2926_c_26 Rep_2926_c_26_69 96711 97562 + PRD | PRD | CAT_RBD
TC Rep_2926_c_26 Rep_2926_c_26_70 97598 98968 + 4.A.1.2.11
CAZyme Rep_2926_c_26 Rep_2926_c_26_71 99094 100560 + GH1
TC Rep_2926_c_26 Rep_2926_c_26_72 100612 101148 + 4.A.1.2.6
Gene ID: Rep_2926_c_26_63
Type: CAZyme
Location: 87344 - 88771 (+)
Gene ID: Rep_2926_c_26_64
Type: CAZyme
Location: 89400 - 90854 (+)
Gene ID: Rep_2926_c_26_65
Type: pfam
Location: 90854 - 91696 (+)
Gene ID: Rep_2926_c_26_66
Type: pfam
Location: 92369 - 93202 (+)
Gene ID: Rep_2926_c_26_67
Type: TC
Location: 93386 - 94825 (+)
Gene ID: Rep_2926_c_26_68
Type: CAZyme
Location: 94909 - 96363 (+)
Gene ID: Rep_2926_c_26_69
Type: pfam
Location: 96711 - 97562 (+)
Gene ID: Rep_2926_c_26_70
Type: TC
Location: 97598 - 98968 (+)
Gene ID: Rep_2926_c_26_71
Type: CAZyme
Location: 99094 - 100560 (+)
Gene ID: Rep_2926_c_26_72
Type: TC
Location: 100612 - 101148 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_2926_c_26_72 vegan > omnivore 1.11816 0.02357

🧭 Explore Read Mapping of CGC

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