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Cluster: Rep_2926_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2926_c_1 Rep_2926_c_1_70 85485 85823 + 4.A.3.1.3
TF Rep_2926_c_1 Rep_2926_c_1_71 85988 87001 - LacI
TC Rep_2926_c_1 Rep_2926_c_1_72 87343 89100 + 4.A.3.1.1
CAZyme Rep_2926_c_1 Rep_2926_c_1_73 89193 90602 + GH1
TF Rep_2926_c_1 Rep_2926_c_1_74 90756 91802 - LacI
TC Rep_2926_c_1 Rep_2926_c_1_75 92191 94077 + 4.A.3.1.1
CAZyme Rep_2926_c_1 Rep_2926_c_1_76 94206 95636 + GH1
NULL(UNKNOWN) Rep_2926_c_1 Rep_2926_c_1_77 95694 96320 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2926_c_1 Rep_2926_c_1_78 96431 97591 - CE9
STP Rep_2926_c_1 Rep_2926_c_1_79 97820 98983 - SIS | SIS
TF Rep_2926_c_1 Rep_2926_c_1_80 99095 99826 - GntR
TC Rep_2926_c_1 Rep_2926_c_1_81 99944 100372 - 4.A.6.1.6
NULL(UNKNOWN) Rep_2926_c_1 Rep_2926_c_1_82 100685 101320 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2926_c_1 Rep_2926_c_1_83 101671 102504 - 4.A.6.1.18
TC Rep_2926_c_1 Rep_2926_c_1_84 102494 103378 - 4.A.6.1.18
TC Rep_2926_c_1 Rep_2926_c_1_85 103477 103941 - 4.A.6.1.18
CAZyme Rep_2926_c_1 Rep_2926_c_1_86 103943 105799 - GH35
peptidase Rep_2926_c_1 Rep_2926_c_1_87 106455 107894 + M20.UPD
TC Rep_2926_c_1 Rep_2926_c_1_88 108052 108867 - 2.A.5.5.2
Gene ID: Rep_2926_c_1_70
Type: TC
Location: 85485 - 85823 (+)
Gene ID: Rep_2926_c_1_71
Type: TF
Location: 85988 - 87001 (-)
Gene ID: Rep_2926_c_1_72
Type: TC
Location: 87343 - 89100 (+)
Gene ID: Rep_2926_c_1_73
Type: CAZyme
Location: 89193 - 90602 (+)
Gene ID: Rep_2926_c_1_74
Type: TF
Location: 90756 - 91802 (-)
Gene ID: Rep_2926_c_1_75
Type: TC
Location: 92191 - 94077 (+)
Gene ID: Rep_2926_c_1_76
Type: CAZyme
Location: 94206 - 95636 (+)
Gene ID: Rep_2926_c_1_77
Type:
Location: 95694 - 96320 (-)
Gene ID: Rep_2926_c_1_78
Type: CAZyme
Location: 96431 - 97591 (-)
Gene ID: Rep_2926_c_1_79
Type: STP
Location: 97820 - 98983 (-)
Gene ID: Rep_2926_c_1_80
Type: TF
Location: 99095 - 99826 (-)
Gene ID: Rep_2926_c_1_81
Type: TC
Location: 99944 - 100372 (-)
Gene ID: Rep_2926_c_1_82
Type:
Location: 100685 - 101320 (-)
Gene ID: Rep_2926_c_1_83
Type: TC
Location: 101671 - 102504 (-)
Gene ID: Rep_2926_c_1_84
Type: TC
Location: 102494 - 103378 (-)
Gene ID: Rep_2926_c_1_85
Type: TC
Location: 103477 - 103941 (-)
Gene ID: Rep_2926_c_1_86
Type: CAZyme
Location: 103943 - 105799 (-)
Gene ID: Rep_2926_c_1_87
Type: peptidase
Location: 106455 - 107894 (+)
Gene ID: Rep_2926_c_1_88
Type: TC
Location: 108052 - 108867 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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