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Cluster: Rep_291_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_291_c_39 Rep_291_c_39_3 1369 2163 - 9.B.104.1.2
peptidase Rep_291_c_39 Rep_291_c_39_4 2147 2917 - S54.UPW
pfam Rep_291_c_39 Rep_291_c_39_5 3114 3377 + Bac_DNA_binding
TC Rep_291_c_39 Rep_291_c_39_6 3726 4481 + 1.B.44.1.1
pfam Rep_291_c_39 Rep_291_c_39_7 4483 5481 + PorP_SprF
TC Rep_291_c_39 Rep_291_c_39_8 5507 6973 + 9.A.25.1.1
TC Rep_291_c_39 Rep_291_c_39_9 6995 8023 + 9.A.25.1.1
TC Rep_291_c_39 Rep_291_c_39_10 8153 9742 + 9.A.25.1.1
pfam Rep_291_c_39 Rep_291_c_39_11 9759 10967 + GldN
NULL(UNKNOWN) Rep_291_c_39 Rep_291_c_39_12 11428 11817 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_291_c_39 Rep_291_c_39_13 11852 12877 - GT2
Gene ID: Rep_291_c_39_3
Type: TC
Location: 1369 - 2163 (-)
Gene ID: Rep_291_c_39_4
Type: peptidase
Location: 2147 - 2917 (-)
Gene ID: Rep_291_c_39_5
Type: pfam
Location: 3114 - 3377 (+)
Gene ID: Rep_291_c_39_6
Type: TC
Location: 3726 - 4481 (+)
Gene ID: Rep_291_c_39_7
Type: pfam
Location: 4483 - 5481 (+)
Gene ID: Rep_291_c_39_8
Type: TC
Location: 5507 - 6973 (+)
Gene ID: Rep_291_c_39_9
Type: TC
Location: 6995 - 8023 (+)
Gene ID: Rep_291_c_39_10
Type: TC
Location: 8153 - 9742 (+)
Gene ID: Rep_291_c_39_11
Type: pfam
Location: 9759 - 10967 (+)
Gene ID: Rep_291_c_39_12
Type:
Location: 11428 - 11817 (+)
Gene ID: Rep_291_c_39_13
Type: CAZyme
Location: 11852 - 12877 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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