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Cluster: Rep_291_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_291_c_35 Rep_291_c_35_19 16302 17918 - 3.D.4.3.2
pfam Rep_291_c_35 Rep_291_c_35_20 17985 19508 - Polysacc_synt | Polysacc_synt_3
TC Rep_291_c_35 Rep_291_c_35_21 19551 21044 - 9.B.145.1.2
STP Rep_291_c_35 Rep_291_c_35_22 21108 22790 - TPR_1
STP Rep_291_c_35 Rep_291_c_35_23 22935 24485 - PglZ | Response_reg
CAZyme Rep_291_c_35 Rep_291_c_35_24 24541 27198 - GH147
NULL(UNKNOWN) Rep_291_c_35 Rep_291_c_35_25 27274 27828 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_291_c_35 Rep_291_c_35_26 28030 29487 + 2.A.103.1.3
CAZyme Rep_291_c_35 Rep_291_c_35_27 29497 30597 + GT28
Gene ID: Rep_291_c_35_19
Type: TC
Location: 16302 - 17918 (-)
Gene ID: Rep_291_c_35_20
Type: pfam
Location: 17985 - 19508 (-)
Gene ID: Rep_291_c_35_21
Type: TC
Location: 19551 - 21044 (-)
Gene ID: Rep_291_c_35_22
Type: STP
Location: 21108 - 22790 (-)
Gene ID: Rep_291_c_35_23
Type: STP
Location: 22935 - 24485 (-)
Gene ID: Rep_291_c_35_24
Type: CAZyme
Location: 24541 - 27198 (-)
Gene ID: Rep_291_c_35_25
Type:
Location: 27274 - 27828 (-)
Gene ID: Rep_291_c_35_26
Type: TC
Location: 28030 - 29487 (+)
Gene ID: Rep_291_c_35_27
Type: CAZyme
Location: 29497 - 30597 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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