dbCAN Logo

Cluster: Rep_291_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_291_c_32 Rep_291_c_32_3 3617 5650 - GH13_8
NULL(UNKNOWN) Rep_291_c_32 Rep_291_c_32_4 5792 5968 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_291_c_32 Rep_291_c_32_5 6049 8616 - GT35
CAZyme Rep_291_c_32 Rep_291_c_32_6 8644 10341 - GT3
pfam Rep_291_c_32 Rep_291_c_32_7 10551 11450 - ABC2_membrane_3
TC Rep_291_c_32 Rep_291_c_32_8 11568 12494 - 3.A.1.131.3
pfam Rep_291_c_32 Rep_291_c_32_9 12491 13135 - Ribul_P_3_epim
pfam Rep_291_c_32 Rep_291_c_32_10 13140 13829 - VTT_dom
CAZyme Rep_291_c_32 Rep_291_c_32_11 14066 14812 + GT2
TC Rep_291_c_32 Rep_291_c_32_12 14979 15836 + 1.A.23.2.1
Gene ID: Rep_291_c_32_3
Type: CAZyme
Location: 3617 - 5650 (-)
Gene ID: Rep_291_c_32_4
Type:
Location: 5792 - 5968 (-)
Gene ID: Rep_291_c_32_5
Type: CAZyme
Location: 6049 - 8616 (-)
Gene ID: Rep_291_c_32_6
Type: CAZyme
Location: 8644 - 10341 (-)
Gene ID: Rep_291_c_32_7
Type: pfam
Location: 10551 - 11450 (-)
Gene ID: Rep_291_c_32_8
Type: TC
Location: 11568 - 12494 (-)
Gene ID: Rep_291_c_32_9
Type: pfam
Location: 12491 - 13135 (-)
Gene ID: Rep_291_c_32_10
Type: pfam
Location: 13140 - 13829 (-)
Gene ID: Rep_291_c_32_11
Type: CAZyme
Location: 14066 - 14812 (+)
Gene ID: Rep_291_c_32_12
Type: TC
Location: 14979 - 15836 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List