Cluster: Rep_290_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_290
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_290_c_2 | Rep_290_c_2_22 | 28995 | 30023 | - | 1.A.23.2.1 |
| CAZyme | Rep_290_c_2 | Rep_290_c_2_23 | 30053 | 30793 | - | GT2 |
| pfam | Rep_290_c_2 | Rep_290_c_2_24 | 31012 | 31692 | + | VTT_dom |
| pfam | Rep_290_c_2 | Rep_290_c_2_25 | 31727 | 32371 | + | Ribul_P_3_epim |
| TC | Rep_290_c_2 | Rep_290_c_2_26 | 32382 | 33311 | + | 3.A.1.128.7 |
Gene ID: Rep_290_c_2_22
Type: TC
Location: 28995 - 30023 (-)
Type: TC
Location: 28995 - 30023 (-)
Gene ID: Rep_290_c_2_23
Type: CAZyme
Location: 30053 - 30793 (-)
Type: CAZyme
Location: 30053 - 30793 (-)
Gene ID: Rep_290_c_2_24
Type: pfam
Location: 31012 - 31692 (+)
Type: pfam
Location: 31012 - 31692 (+)
Gene ID: Rep_290_c_2_25
Type: pfam
Location: 31727 - 32371 (+)
Type: pfam
Location: 31727 - 32371 (+)
Gene ID: Rep_290_c_2_26
Type: TC
Location: 32382 - 33311 (+)
Type: TC
Location: 32382 - 33311 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp902491625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.