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Cluster: Rep_2905_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2905_c_14 Rep_2905_c_14_7 7955 9460 + GH77
CAZyme Rep_2905_c_14 Rep_2905_c_14_8 9588 11855 + GT35
TC Rep_2905_c_14 Rep_2905_c_14_9 12308 13507 - 3.A.1.1.22
TC Rep_2905_c_14 Rep_2905_c_14_10 13576 14415 - 3.A.1.1.45
TC Rep_2905_c_14 Rep_2905_c_14_11 14415 15269 - 3.A.1.1.45
TC Rep_2905_c_14 Rep_2905_c_14_12 15357 16673 - 3.A.1.1.45
TF Rep_2905_c_14 Rep_2905_c_14_13 16980 17699 - GntR
TC Rep_2905_c_14 Rep_2905_c_14_14 17924 20302 + 4.A.1.1.8
Gene ID: Rep_2905_c_14_7
Type: CAZyme
Location: 7955 - 9460 (+)
Gene ID: Rep_2905_c_14_8
Type: CAZyme
Location: 9588 - 11855 (+)
Gene ID: Rep_2905_c_14_9
Type: TC
Location: 12308 - 13507 (-)
Gene ID: Rep_2905_c_14_10
Type: TC
Location: 13576 - 14415 (-)
Gene ID: Rep_2905_c_14_11
Type: TC
Location: 14415 - 15269 (-)
Gene ID: Rep_2905_c_14_12
Type: TC
Location: 15357 - 16673 (-)
Gene ID: Rep_2905_c_14_13
Type: TF
Location: 16980 - 17699 (-)
Gene ID: Rep_2905_c_14_14
Type: TC
Location: 17924 - 20302 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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