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Cluster: Rep_287_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_287_c_9 Rep_287_c_9_11 10811 11617 - GT5
pfam Rep_287_c_9 Rep_287_c_9_12 11982 12809 + Pantoate_ligase
pfam Rep_287_c_9 Rep_287_c_9_13 12818 13177 + Asp_decarbox
TC Rep_287_c_9 Rep_287_c_9_14 13196 14554 + 3.A.5.2.2
pfam Rep_287_c_9 Rep_287_c_9_15 14989 15675 + OMP_b-brl_2
pfam Rep_287_c_9 Rep_287_c_9_16 15749 16735 - WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep
CAZyme Rep_287_c_9 Rep_287_c_9_17 17171 18406 - GH171
pfam Rep_287_c_9 Rep_287_c_9_18 18399 19574 - SpoIID
pfam Rep_287_c_9 Rep_287_c_9_19 19571 20518 - DUF4922
CAZyme Rep_287_c_9 Rep_287_c_9_20 20551 21891 - GT2
Gene ID: Rep_287_c_9_11
Type: CAZyme
Location: 10811 - 11617 (-)
Gene ID: Rep_287_c_9_12
Type: pfam
Location: 11982 - 12809 (+)
Gene ID: Rep_287_c_9_13
Type: pfam
Location: 12818 - 13177 (+)
Gene ID: Rep_287_c_9_14
Type: TC
Location: 13196 - 14554 (+)
Gene ID: Rep_287_c_9_15
Type: pfam
Location: 14989 - 15675 (+)
Gene ID: Rep_287_c_9_16
Type: pfam
Location: 15749 - 16735 (-)
Gene ID: Rep_287_c_9_17
Type: CAZyme
Location: 17171 - 18406 (-)
Gene ID: Rep_287_c_9_18
Type: pfam
Location: 18399 - 19574 (-)
Gene ID: Rep_287_c_9_19
Type: pfam
Location: 19571 - 20518 (-)
Gene ID: Rep_287_c_9_20
Type: CAZyme
Location: 20551 - 21891 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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