Cluster: Rep_287_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_287
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_287_c_4 | Rep_287_c_4_32 | 33023 | 34033 | + | 2.A.19.5.2 |
| NULL(UNKNOWN) | Rep_287_c_4 | Rep_287_c_4_33 | 34014 | 34736 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_287_c_4 | Rep_287_c_4_34 | 34872 | 36290 | - | GH57 |
| CAZyme | Rep_287_c_4 | Rep_287_c_4_35 | 36302 | 37558 | - | GT4 |
| CAZyme | Rep_287_c_4 | Rep_287_c_4_36 | 37561 | 39576 | - | GH133 |
| pfam | Rep_287_c_4 | Rep_287_c_4_37 | 39863 | 40525 | - | Sel1 | Sel1 | Sel1 | Sel1 |
| TC | Rep_287_c_4 | Rep_287_c_4_38 | 40625 | 42019 | - | 9.B.18.1.1 |
Gene ID: Rep_287_c_4_32
Type: TC
Location: 33023 - 34033 (+)
Type: TC
Location: 33023 - 34033 (+)
Gene ID: Rep_287_c_4_33
Type:
Location: 34014 - 34736 (-)
Type:
Location: 34014 - 34736 (-)
Gene ID: Rep_287_c_4_34
Type: CAZyme
Location: 34872 - 36290 (-)
Type: CAZyme
Location: 34872 - 36290 (-)
Gene ID: Rep_287_c_4_35
Type: CAZyme
Location: 36302 - 37558 (-)
Type: CAZyme
Location: 36302 - 37558 (-)
Gene ID: Rep_287_c_4_36
Type: CAZyme
Location: 37561 - 39576 (-)
Type: CAZyme
Location: 37561 - 39576 (-)
Gene ID: Rep_287_c_4_37
Type: pfam
Location: 39863 - 40525 (-)
Type: pfam
Location: 39863 - 40525 (-)
Gene ID: Rep_287_c_4_38
Type: TC
Location: 40625 - 42019 (-)
Type: TC
Location: 40625 - 42019 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp002491165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.