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Cluster: Rep_2875_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2875_c_0 Rep_2875_c_0_878 1019823 1021505 + 2.A.66.4.4
pfam Rep_2875_c_0 Rep_2875_c_0_879 1021512 1023452 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC Rep_2875_c_0 Rep_2875_c_0_880 1023818 1025431 + 3.A.1.5.27
TC Rep_2875_c_0 Rep_2875_c_0_881 1025587 1026543 + 3.A.1.5.38
TC Rep_2875_c_0 Rep_2875_c_0_882 1026547 1028562 + 3.A.1.5.25
TC Rep_2875_c_0 Rep_2875_c_0_883 1028563 1029390 + 3.A.1.5.27
CAZyme Rep_2875_c_0 Rep_2875_c_0_884 1029522 1030448 + CE7
Gene ID: Rep_2875_c_0_878
Type: TC
Location: 1019823 - 1021505 (+)
Gene ID: Rep_2875_c_0_879
Type: pfam
Location: 1021512 - 1023452 (+)
Gene ID: Rep_2875_c_0_880
Type: TC
Location: 1023818 - 1025431 (+)
Gene ID: Rep_2875_c_0_881
Type: TC
Location: 1025587 - 1026543 (+)
Gene ID: Rep_2875_c_0_882
Type: TC
Location: 1026547 - 1028562 (+)
Gene ID: Rep_2875_c_0_883
Type: TC
Location: 1028563 - 1029390 (+)
Gene ID: Rep_2875_c_0_884
Type: CAZyme
Location: 1029522 - 1030448 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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